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TMEM8 – a non-globin gene entrapped in the globin web
For more than 30 years it was believed that globin gene domains included only genes encoding globin chains. Here we show that in chickens, the domain of α-globin genes also harbor the non-globin gene TMEM8. It was relocated to the vicinity of the α-globin cluster due to inversion of an ∼170-kb genom...
Autores principales: | , , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2009
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2794187/ https://www.ncbi.nlm.nih.gov/pubmed/19820109 http://dx.doi.org/10.1093/nar/gkp838 |
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author | Philonenko, Elena S. Klochkov, Denis B. Borunova, Victoria V. Gavrilov, Alexey A. Razin, Sergey V. Iarovaia, Olga V. |
author_facet | Philonenko, Elena S. Klochkov, Denis B. Borunova, Victoria V. Gavrilov, Alexey A. Razin, Sergey V. Iarovaia, Olga V. |
author_sort | Philonenko, Elena S. |
collection | PubMed |
description | For more than 30 years it was believed that globin gene domains included only genes encoding globin chains. Here we show that in chickens, the domain of α-globin genes also harbor the non-globin gene TMEM8. It was relocated to the vicinity of the α-globin cluster due to inversion of an ∼170-kb genomic fragment. Although in humans TMEM8 is preferentially expressed in resting T-lymphocytes, in chickens it acquired an erythroid-specific expression profile and is upregulated upon terminal differentiation of erythroblasts. This correlates with the presence of erythroid-specific regulatory elements in the body of chicken TMEM8, which interact with regulatory elements of the α-globin genes. Surprisingly, TMEM8 is not simply recruited to the α-globin gene domain active chromatin hub. An alternative chromatin hub is assembled, which includes some of the regulatory elements essential for the activation of globin gene expression. These regulatory elements should thus shuttle between two different chromatin hubs. |
format | Text |
id | pubmed-2794187 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-27941872009-12-16 TMEM8 – a non-globin gene entrapped in the globin web Philonenko, Elena S. Klochkov, Denis B. Borunova, Victoria V. Gavrilov, Alexey A. Razin, Sergey V. Iarovaia, Olga V. Nucleic Acids Res Gene Regulation, Chromatin and Epigenetics For more than 30 years it was believed that globin gene domains included only genes encoding globin chains. Here we show that in chickens, the domain of α-globin genes also harbor the non-globin gene TMEM8. It was relocated to the vicinity of the α-globin cluster due to inversion of an ∼170-kb genomic fragment. Although in humans TMEM8 is preferentially expressed in resting T-lymphocytes, in chickens it acquired an erythroid-specific expression profile and is upregulated upon terminal differentiation of erythroblasts. This correlates with the presence of erythroid-specific regulatory elements in the body of chicken TMEM8, which interact with regulatory elements of the α-globin genes. Surprisingly, TMEM8 is not simply recruited to the α-globin gene domain active chromatin hub. An alternative chromatin hub is assembled, which includes some of the regulatory elements essential for the activation of globin gene expression. These regulatory elements should thus shuttle between two different chromatin hubs. Oxford University Press 2009-12 2009-10-09 /pmc/articles/PMC2794187/ /pubmed/19820109 http://dx.doi.org/10.1093/nar/gkp838 Text en © The Author(s) 2009. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Gene Regulation, Chromatin and Epigenetics Philonenko, Elena S. Klochkov, Denis B. Borunova, Victoria V. Gavrilov, Alexey A. Razin, Sergey V. Iarovaia, Olga V. TMEM8 – a non-globin gene entrapped in the globin web |
title | TMEM8 – a non-globin gene entrapped in the globin web |
title_full | TMEM8 – a non-globin gene entrapped in the globin web |
title_fullStr | TMEM8 – a non-globin gene entrapped in the globin web |
title_full_unstemmed | TMEM8 – a non-globin gene entrapped in the globin web |
title_short | TMEM8 – a non-globin gene entrapped in the globin web |
title_sort | tmem8 – a non-globin gene entrapped in the globin web |
topic | Gene Regulation, Chromatin and Epigenetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2794187/ https://www.ncbi.nlm.nih.gov/pubmed/19820109 http://dx.doi.org/10.1093/nar/gkp838 |
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