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Growth Landscape Formed by Perception and Import of Glucose in Yeast

An important challenge in systems biology is to quantitatively describe microbial growth using a few measurable parameters that capture the essence of this complex phenomenon. Two key events at the cell membrane – extracellular glucose sensing and uptake – initiate the budding yeast’s growth on gluc...

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Detalles Bibliográficos
Autores principales: Youk, Hyun, van Oudenaarden, Alexander
Formato: Texto
Lenguaje:English
Publicado: 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2796206/
https://www.ncbi.nlm.nih.gov/pubmed/20016593
http://dx.doi.org/10.1038/nature08653
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author Youk, Hyun
van Oudenaarden, Alexander
author_facet Youk, Hyun
van Oudenaarden, Alexander
author_sort Youk, Hyun
collection PubMed
description An important challenge in systems biology is to quantitatively describe microbial growth using a few measurable parameters that capture the essence of this complex phenomenon. Two key events at the cell membrane – extracellular glucose sensing and uptake – initiate the budding yeast’s growth on glucose. However, conventional growth models focus almost exclusively on glucose uptake. Here we present results from growth-rate experiments that cannot be explained by focusing on glucose uptake alone. By imposing a glucose uptake rate independent of the sensed extracellular glucose level, we show that despite increasing both the sensed glucose concentration and uptake rate, the cell’s growth rate can decrease or even approach zero. We resolve this puzzle by showing that the interaction between glucose perception and import, not their individual actions, determines the central features of growth and characterize this interaction using a quantitative model. Disrupting this interaction by knocking out two key glucose sensors significantly changes the cell’s growth rate, yet uptake rates are unchanged. This is due to a decrease in burden that glucose perception places on the cells. Our work shows that glucose perception and import are separate and pivotal modules of yeast growth whose interplay can be precisely tuned and measured.
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spelling pubmed-27962062010-06-17 Growth Landscape Formed by Perception and Import of Glucose in Yeast Youk, Hyun van Oudenaarden, Alexander Nature Article An important challenge in systems biology is to quantitatively describe microbial growth using a few measurable parameters that capture the essence of this complex phenomenon. Two key events at the cell membrane – extracellular glucose sensing and uptake – initiate the budding yeast’s growth on glucose. However, conventional growth models focus almost exclusively on glucose uptake. Here we present results from growth-rate experiments that cannot be explained by focusing on glucose uptake alone. By imposing a glucose uptake rate independent of the sensed extracellular glucose level, we show that despite increasing both the sensed glucose concentration and uptake rate, the cell’s growth rate can decrease or even approach zero. We resolve this puzzle by showing that the interaction between glucose perception and import, not their individual actions, determines the central features of growth and characterize this interaction using a quantitative model. Disrupting this interaction by knocking out two key glucose sensors significantly changes the cell’s growth rate, yet uptake rates are unchanged. This is due to a decrease in burden that glucose perception places on the cells. Our work shows that glucose perception and import are separate and pivotal modules of yeast growth whose interplay can be precisely tuned and measured. 2009-12-17 /pmc/articles/PMC2796206/ /pubmed/20016593 http://dx.doi.org/10.1038/nature08653 Text en Users may view, print, copy, download and text and data- mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use: http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Youk, Hyun
van Oudenaarden, Alexander
Growth Landscape Formed by Perception and Import of Glucose in Yeast
title Growth Landscape Formed by Perception and Import of Glucose in Yeast
title_full Growth Landscape Formed by Perception and Import of Glucose in Yeast
title_fullStr Growth Landscape Formed by Perception and Import of Glucose in Yeast
title_full_unstemmed Growth Landscape Formed by Perception and Import of Glucose in Yeast
title_short Growth Landscape Formed by Perception and Import of Glucose in Yeast
title_sort growth landscape formed by perception and import of glucose in yeast
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2796206/
https://www.ncbi.nlm.nih.gov/pubmed/20016593
http://dx.doi.org/10.1038/nature08653
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