Cargando…

Characteristics of Transcriptional Activity in Nonlinear Dynamics of Genetic Regulatory Networks

Microarray measurements of mRNA abundances is a standard tool for evaluation of transcriptional activity in functional genomics. The methodology underlying these measurements assumes existence of a direct link between transcription levels, that is, gene-specific mRNA copy numbers present in the cell...

Descripción completa

Detalles Bibliográficos
Autor principal:	Rosenfeld, Simon
Formato:	Texto
Lenguaje:	English
Publicado:	Libertas Academica 2009
Materias:	Original Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2796971/ https://www.ncbi.nlm.nih.gov/pubmed/20054406

Ejemplares similares

Stochastic Oscillations in Genetic Regulatory Networks: Application to Microarray Experiments
por: Rosenfeld, Simon
Publicado: (2006)

Nonlinear Dynamic Trans/Cis Regulatory Circuit for Gene Transcription via Microarray Data
por: Chang, Yu-Hsiang, et al.
Publicado: (2007)

A computational framework for qualitative simulation of nonlinear dynamical models of gene-regulatory networks
por: Ironi, Liliana, et al.
Publicado: (2009)

Nonlinear dynamics of large-scale activity in "networks of networks"
por: Lagzi, Fereshteh, et al.
Publicado: (2013)

Critical Self-Organized Self-Sustained Oscillations in Large Regulatory Networks: Towards Understanding the Gene Expression Initiation
por: Rosenfeld, Simon
Publicado: (2011)

OKVAR-Boost: a novel boosting algorithm to infer nonlinear dynamics and interactions in gene regulatory networks
por: Lim, Néhémy, et al.
Publicado: (2013)

Inferring a Transcriptional Regulatory Network from Gene Expression Data Using Nonlinear Manifold Embedding
por: Zare, Hossein, et al.
Publicado: (2011)

Dynamics of genetic variation in transcription factors and its implications for the evolution of regulatory networks in Bacteria
por: Ali, Farhan, et al.
Publicado: (2020)

Patterns of Stochastic Behavior in Dynamically Unstable High-Dimensional Biochemical Networks
por: Rosenfeld, Simon
Publicado: (2009)

Conservation of dynamic characteristics of transcriptional regulatory elements in periodic biological processes
por: Motta, Francis C., et al.
Publicado: (2022)

Landscape and Dynamics of the Transcriptional Regulatory Network During Natural Killer Cell Differentiation
por: Li, Kun, et al.
Publicado: (2020)

Selection Shapes Transcriptional Logic and Regulatory Specialization in Genetic Networks
por: Fogelmark, Karl, et al.
Publicado: (2016)

Regularized EM algorithm for sparse parameter estimation in nonlinear dynamic systems with application to gene regulatory network inference
por: Jia, Bin, et al.
Publicado: (2014)

Inferring gene regulatory networks using transcriptional profiles as dynamical attractors
por: Li, Ruihao, et al.
Publicado: (2023)

Dynamic regulatory module networks for inference of cell type–specific transcriptional networks
por: Siahpirani, Alireza Fotuhi, et al.
Publicado: (2022)

Dynamic regulatory networks of T cell trajectory dissect transcriptional control of T cell state transition
por: Yan, Min, et al.
Publicado: (2021)

Systems Medicine of Cancer: Bringing Together Clinical Data and Nonlinear Dynamics of Genetic Networks
por: Blyuss, Konstantin B., et al.
Publicado: (2016)

Construction and analysis of dynamic transcription factor regulatory networks in the progression of glioma
por: Li, Yongsheng, et al.
Publicado: (2015)

Crosstalk and the Dynamical Modularity of Feed-Forward Loops in Transcriptional Regulatory Networks
por: Rowland, Michael A., et al.
Publicado: (2017)

Critical Dynamics in Genetic Regulatory Networks: Examples from Four Kingdoms
por: Balleza, Enrique, et al.
Publicado: (2008)

Irrelevance of linear controllability to nonlinear dynamical networks
por: Jiang, Junjie, et al.
Publicado: (2019)

Modeling the Nonlinear Dynamics of Intracellular Signaling Networks
por: Rukhlenko, Oleksii S., et al.
Publicado: (2021)

Nonlinear network dynamics, stability and growth in ecosystems
por: Messer, J
Publicado: (1994)

Synchronization in Complex Networks of Nonlinear Dynamical Systems
por: Wu, Chai Wah
Publicado: (2007)

Graphics Processing Unit–Enhanced Genetic Algorithms for Solving the Temporal Dynamics of Gene Regulatory Networks
por: García-Calvo, Raúl, et al.
Publicado: (2018)

Functional data analysis for identifying nonlinear models of gene regulatory networks
por: Summer, Georg, et al.
Publicado: (2010)

The Transcriptional Regulatory Network of Mycobacterium tuberculosis
por: Sanz, Joaquín, et al.
Publicado: (2011)

RegNetwork: an integrated database of transcriptional and post-transcriptional regulatory networks in human and mouse
por: Liu, Zhi-Ping, et al.
Publicado: (2015)

Simulated nonlinear genetic and environmental dynamics of complex traits
por: Hunter, Michael D., et al.
Publicado: (2023)

Identifying genetic regulatory variants that affect transcription factor activity
por: Li, Xiaoting, et al.
Publicado: (2023)

Genetic Regulatory Networks
por: Dougherty, Edward R, et al.
Publicado: (2007)

Reconstructing dynamic gene regulatory networks from sample-based transcriptional data
por: Zhu, Hailong, et al.
Publicado: (2012)

Dynamical gene regulatory networks are tuned by transcriptional autoregulation with microRNA feedback
por: Minchington, Thomas G., et al.
Publicado: (2020)

Factor analysis for gene regulatory networks and transcription factor activity profiles
por: Pournara, Iosifina, et al.
Publicado: (2007)

The nonlinear dynamics and fluctuations of mRNA levels in cell cycle coupled transcription
por: Sun, Qiwen, et al.
Publicado: (2019)

Using Network Component Analysis to Dissect Regulatory Networks Mediated by Transcription Factors in Yeast
por: Ye, Chun, et al.
Publicado: (2009)

The Dynamic Genetic-Hormonal Regulatory Network Controlling the Trichome Development in Leaves
por: Fambrini, Marco, et al.
Publicado: (2019)

Genetic regulatory networks for salt-alkali stress in Gossypium hirsutum with differing morphological characteristics
por: Xu, Yanchao, et al.
Publicado: (2020)

Symposium on Oscillation, Chaos and Network Dynamics in Nonlinear Science
por: Shinomoto, Shigeru, et al.
Publicado: (2006)

A compendium of Caenhorabditis elegans regulatory transcription factors: a resource for mapping transcription regulatory networks
por: Reece-Hoyes, John S, et al.
Publicado: (2005)

Cannot write session to /tmp/vufind_sessions/sess_vlgit4v1b45aikro5h9uf2rvu1