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An association study of SERPING1 gene and age-related macular degeneration in a Han Chinese population
PURPOSE: Single nucleotide polymorphisms (SNPs) in the complement component 1 inhibitor (SERPING1) gene have been shown to be significantly associated with age-related macular degeneration (AMD) in Caucasian populations. A replication study of an association between these SNPs and AMD in a Chinese p...
Autores principales: | , , , , , , , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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Molecular Vision
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2803124/ https://www.ncbi.nlm.nih.gov/pubmed/20062564 |
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author | Lu, Fang Zhao, Peiquan Fan, Yinchuan Tang, Shibo Hu, Jianbin Liu, Xiaoqi Yang, Xian Chen, Yiye Li, Tao Lei, Chuntao Yang, Jiyun Lin, Ying Ma, Shi Li, Chunyong Shi, Yi Yang, Zhenglin |
author_facet | Lu, Fang Zhao, Peiquan Fan, Yinchuan Tang, Shibo Hu, Jianbin Liu, Xiaoqi Yang, Xian Chen, Yiye Li, Tao Lei, Chuntao Yang, Jiyun Lin, Ying Ma, Shi Li, Chunyong Shi, Yi Yang, Zhenglin |
author_sort | Lu, Fang |
collection | PubMed |
description | PURPOSE: Single nucleotide polymorphisms (SNPs) in the complement component 1 inhibitor (SERPING1) gene have been shown to be significantly associated with age-related macular degeneration (AMD) in Caucasian populations. A replication study of an association between these SNPs and AMD in a Chinese population is reported in this study. METHODS: Six SNPs, including rs2511990, rs1005510, rs11546660, rs2511989, rs2511988, and rs4926 in SERPING1 were genotyped in a Han Chinese subject group using the SNaPshot method of ABI. This subject group was composed of 194 patients with choroidal neovascularization (CNV or wet) AMD, 78 patients with soft drusen, and 285 matched controls. P values of the SNPs were calculated using an additive model. Haplotype frequencies between cases and controls were compared by χ2 analysis. The haplotype analysis was performed using Haploview 4.0. RESULTS: None of the six SNPs showed significant association with AMD. None of the major haplotypes were observed to be significantly associated with AMD or choroidal neovascularization AMD (CNV) after a stringent Bonferroni correction. CONCLUSIONS: We demonstrate that SNPs in SERPING1 are not significantly associated with AMD in the mainland Han Chinese population. |
format | Text |
id | pubmed-2803124 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Molecular Vision |
record_format | MEDLINE/PubMed |
spelling | pubmed-28031242010-01-08 An association study of SERPING1 gene and age-related macular degeneration in a Han Chinese population Lu, Fang Zhao, Peiquan Fan, Yinchuan Tang, Shibo Hu, Jianbin Liu, Xiaoqi Yang, Xian Chen, Yiye Li, Tao Lei, Chuntao Yang, Jiyun Lin, Ying Ma, Shi Li, Chunyong Shi, Yi Yang, Zhenglin Mol Vis Research Article PURPOSE: Single nucleotide polymorphisms (SNPs) in the complement component 1 inhibitor (SERPING1) gene have been shown to be significantly associated with age-related macular degeneration (AMD) in Caucasian populations. A replication study of an association between these SNPs and AMD in a Chinese population is reported in this study. METHODS: Six SNPs, including rs2511990, rs1005510, rs11546660, rs2511989, rs2511988, and rs4926 in SERPING1 were genotyped in a Han Chinese subject group using the SNaPshot method of ABI. This subject group was composed of 194 patients with choroidal neovascularization (CNV or wet) AMD, 78 patients with soft drusen, and 285 matched controls. P values of the SNPs were calculated using an additive model. Haplotype frequencies between cases and controls were compared by χ2 analysis. The haplotype analysis was performed using Haploview 4.0. RESULTS: None of the six SNPs showed significant association with AMD. None of the major haplotypes were observed to be significantly associated with AMD or choroidal neovascularization AMD (CNV) after a stringent Bonferroni correction. CONCLUSIONS: We demonstrate that SNPs in SERPING1 are not significantly associated with AMD in the mainland Han Chinese population. Molecular Vision 2010-01-10 /pmc/articles/PMC2803124/ /pubmed/20062564 Text en Copyright © 2010 Molecular Vision. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Lu, Fang Zhao, Peiquan Fan, Yinchuan Tang, Shibo Hu, Jianbin Liu, Xiaoqi Yang, Xian Chen, Yiye Li, Tao Lei, Chuntao Yang, Jiyun Lin, Ying Ma, Shi Li, Chunyong Shi, Yi Yang, Zhenglin An association study of SERPING1 gene and age-related macular degeneration in a Han Chinese population |
title | An association study of SERPING1 gene and age-related macular degeneration in a Han Chinese population |
title_full | An association study of SERPING1 gene and age-related macular degeneration in a Han Chinese population |
title_fullStr | An association study of SERPING1 gene and age-related macular degeneration in a Han Chinese population |
title_full_unstemmed | An association study of SERPING1 gene and age-related macular degeneration in a Han Chinese population |
title_short | An association study of SERPING1 gene and age-related macular degeneration in a Han Chinese population |
title_sort | association study of serping1 gene and age-related macular degeneration in a han chinese population |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2803124/ https://www.ncbi.nlm.nih.gov/pubmed/20062564 |
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