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Association of a functional microsatellite within intron 1 of the BMP5 gene with susceptibility to osteoarthritis

BACKGROUND: In a previous study carried out by our group, the genotyping of 36 microsatellite markers from within a narrow interval of chromosome 6p12.3-q13 generated evidence for linkage and for association to female hip osteoarthritis (OA), with the most compelling association found for a marker w...

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Autores principales: Wilkins, James M, Southam, Lorraine, Mustafa, Zehra, Chapman, Kay, Loughlin, John
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2807860/
https://www.ncbi.nlm.nih.gov/pubmed/20021689
http://dx.doi.org/10.1186/1471-2350-10-141
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author Wilkins, James M
Southam, Lorraine
Mustafa, Zehra
Chapman, Kay
Loughlin, John
author_facet Wilkins, James M
Southam, Lorraine
Mustafa, Zehra
Chapman, Kay
Loughlin, John
author_sort Wilkins, James M
collection PubMed
description BACKGROUND: In a previous study carried out by our group, the genotyping of 36 microsatellite markers from within a narrow interval of chromosome 6p12.3-q13 generated evidence for linkage and for association to female hip osteoarthritis (OA), with the most compelling association found for a marker within intron 1 of the bone morphogenetic protein 5 gene (BMP5). In this study, we aimed to further categorize the association of variants within intron 1 of BMP5 with OA through an expanded genetic association study of the intron and subsequent functional analysis of associated polymorphisms. METHODS: We genotyped 18 common polymorphisms including 8 microsatellites and 9 single nucleotide polymorphisms (SNPs) and 1 insertion/deletion (INDEL) from within highly conserved regions between human and mouse within intron 1 of BMP5. These markers were then tested for association to OA by a two-stage approach in which the polymorphisms were initially genotyped in a case-control cohort comprising 361 individuals with associated polymorphisms (P ≤ 0.05) then genotyped in a second case-control cohort comprising 1185 individuals. RESULTS: Two BMP5 intron 1 polymorphisms demonstrated association in the combined case-control cohort of 1546 individuals (765 cases and 781 controls): microsatellite D6S1276 (P = 0.018) and SNP rs921126 (P = 0.013). Functional analyses in osteoblastic, chondrocytic, and adipocytic cell lines indicated that allelic variants of D6S1276 have significant effects on the transcriptional activity of the BMP5 promoter in vitro. CONCLUSION: Variability in gene expression of BMP5 may be an important contributor to OA genetic susceptibility.
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spelling pubmed-28078602010-01-19 Association of a functional microsatellite within intron 1 of the BMP5 gene with susceptibility to osteoarthritis Wilkins, James M Southam, Lorraine Mustafa, Zehra Chapman, Kay Loughlin, John BMC Med Genet Research article BACKGROUND: In a previous study carried out by our group, the genotyping of 36 microsatellite markers from within a narrow interval of chromosome 6p12.3-q13 generated evidence for linkage and for association to female hip osteoarthritis (OA), with the most compelling association found for a marker within intron 1 of the bone morphogenetic protein 5 gene (BMP5). In this study, we aimed to further categorize the association of variants within intron 1 of BMP5 with OA through an expanded genetic association study of the intron and subsequent functional analysis of associated polymorphisms. METHODS: We genotyped 18 common polymorphisms including 8 microsatellites and 9 single nucleotide polymorphisms (SNPs) and 1 insertion/deletion (INDEL) from within highly conserved regions between human and mouse within intron 1 of BMP5. These markers were then tested for association to OA by a two-stage approach in which the polymorphisms were initially genotyped in a case-control cohort comprising 361 individuals with associated polymorphisms (P ≤ 0.05) then genotyped in a second case-control cohort comprising 1185 individuals. RESULTS: Two BMP5 intron 1 polymorphisms demonstrated association in the combined case-control cohort of 1546 individuals (765 cases and 781 controls): microsatellite D6S1276 (P = 0.018) and SNP rs921126 (P = 0.013). Functional analyses in osteoblastic, chondrocytic, and adipocytic cell lines indicated that allelic variants of D6S1276 have significant effects on the transcriptional activity of the BMP5 promoter in vitro. CONCLUSION: Variability in gene expression of BMP5 may be an important contributor to OA genetic susceptibility. BioMed Central 2009-12-19 /pmc/articles/PMC2807860/ /pubmed/20021689 http://dx.doi.org/10.1186/1471-2350-10-141 Text en Copyright ©2009 Wilkins et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research article
Wilkins, James M
Southam, Lorraine
Mustafa, Zehra
Chapman, Kay
Loughlin, John
Association of a functional microsatellite within intron 1 of the BMP5 gene with susceptibility to osteoarthritis
title Association of a functional microsatellite within intron 1 of the BMP5 gene with susceptibility to osteoarthritis
title_full Association of a functional microsatellite within intron 1 of the BMP5 gene with susceptibility to osteoarthritis
title_fullStr Association of a functional microsatellite within intron 1 of the BMP5 gene with susceptibility to osteoarthritis
title_full_unstemmed Association of a functional microsatellite within intron 1 of the BMP5 gene with susceptibility to osteoarthritis
title_short Association of a functional microsatellite within intron 1 of the BMP5 gene with susceptibility to osteoarthritis
title_sort association of a functional microsatellite within intron 1 of the bmp5 gene with susceptibility to osteoarthritis
topic Research article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2807860/
https://www.ncbi.nlm.nih.gov/pubmed/20021689
http://dx.doi.org/10.1186/1471-2350-10-141
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