Cargando…
Protein Structure Initiative Material Repository: an open shared public resource of structural genomics plasmids for the biological community
The Protein Structure Initiative Material Repository (PSI-MR; http://psimr.asu.edu) provides centralized storage and distribution for the protein expression plasmids created by PSI researchers. These plasmids are a resource that allows the research community to dissect the biological function of pro...
Autores principales: | , , , , , , , , , , |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2010
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2808882/ https://www.ncbi.nlm.nih.gov/pubmed/19906724 http://dx.doi.org/10.1093/nar/gkp999 |
_version_ | 1782176544645447680 |
---|---|
author | Cormier, Catherine Y. Mohr, Stephanie E. Zuo, Dongmei Hu, Yanhui Rolfs, Andreas Kramer, Jason Taycher, Elena Kelley, Fontina Fiacco, Michael Turnbull, Greggory LaBaer, Joshua |
author_facet | Cormier, Catherine Y. Mohr, Stephanie E. Zuo, Dongmei Hu, Yanhui Rolfs, Andreas Kramer, Jason Taycher, Elena Kelley, Fontina Fiacco, Michael Turnbull, Greggory LaBaer, Joshua |
author_sort | Cormier, Catherine Y. |
collection | PubMed |
description | The Protein Structure Initiative Material Repository (PSI-MR; http://psimr.asu.edu) provides centralized storage and distribution for the protein expression plasmids created by PSI researchers. These plasmids are a resource that allows the research community to dissect the biological function of proteins whose structures have been identified by the PSI. The plasmid annotation, which includes the full length sequence, vector information and associated publications, is stored in a freely available, searchable database called DNASU (http://dnasu.asu.edu). Each PSI plasmid is also linked to a variety of additional resources, which facilitates cross-referencing of a particular plasmid to protein annotations and experimental data. Plasmid samples can be requested directly through the website. We have also developed a novel strategy to avoid the most common concern encountered when distributing plasmids namely, the complexity of material transfer agreement (MTA) processing and the resulting delays this causes. The Expedited Process MTA, in which we created a network of institutions that agree to the terms of transfer in advance of a material request, eliminates these delays. Our hope is that by creating a repository of expression-ready plasmids and expediting the process for receiving these plasmids, we will help accelerate the accessibility and pace of scientific discovery. |
format | Text |
id | pubmed-2808882 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-28088822010-01-20 Protein Structure Initiative Material Repository: an open shared public resource of structural genomics plasmids for the biological community Cormier, Catherine Y. Mohr, Stephanie E. Zuo, Dongmei Hu, Yanhui Rolfs, Andreas Kramer, Jason Taycher, Elena Kelley, Fontina Fiacco, Michael Turnbull, Greggory LaBaer, Joshua Nucleic Acids Res Articles The Protein Structure Initiative Material Repository (PSI-MR; http://psimr.asu.edu) provides centralized storage and distribution for the protein expression plasmids created by PSI researchers. These plasmids are a resource that allows the research community to dissect the biological function of proteins whose structures have been identified by the PSI. The plasmid annotation, which includes the full length sequence, vector information and associated publications, is stored in a freely available, searchable database called DNASU (http://dnasu.asu.edu). Each PSI plasmid is also linked to a variety of additional resources, which facilitates cross-referencing of a particular plasmid to protein annotations and experimental data. Plasmid samples can be requested directly through the website. We have also developed a novel strategy to avoid the most common concern encountered when distributing plasmids namely, the complexity of material transfer agreement (MTA) processing and the resulting delays this causes. The Expedited Process MTA, in which we created a network of institutions that agree to the terms of transfer in advance of a material request, eliminates these delays. Our hope is that by creating a repository of expression-ready plasmids and expediting the process for receiving these plasmids, we will help accelerate the accessibility and pace of scientific discovery. Oxford University Press 2010-01 2009-11-11 /pmc/articles/PMC2808882/ /pubmed/19906724 http://dx.doi.org/10.1093/nar/gkp999 Text en © The Author(s) 2009. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Cormier, Catherine Y. Mohr, Stephanie E. Zuo, Dongmei Hu, Yanhui Rolfs, Andreas Kramer, Jason Taycher, Elena Kelley, Fontina Fiacco, Michael Turnbull, Greggory LaBaer, Joshua Protein Structure Initiative Material Repository: an open shared public resource of structural genomics plasmids for the biological community |
title | Protein Structure Initiative Material Repository: an open shared public resource of structural genomics plasmids for the biological community |
title_full | Protein Structure Initiative Material Repository: an open shared public resource of structural genomics plasmids for the biological community |
title_fullStr | Protein Structure Initiative Material Repository: an open shared public resource of structural genomics plasmids for the biological community |
title_full_unstemmed | Protein Structure Initiative Material Repository: an open shared public resource of structural genomics plasmids for the biological community |
title_short | Protein Structure Initiative Material Repository: an open shared public resource of structural genomics plasmids for the biological community |
title_sort | protein structure initiative material repository: an open shared public resource of structural genomics plasmids for the biological community |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2808882/ https://www.ncbi.nlm.nih.gov/pubmed/19906724 http://dx.doi.org/10.1093/nar/gkp999 |
work_keys_str_mv | AT cormiercatheriney proteinstructureinitiativematerialrepositoryanopensharedpublicresourceofstructuralgenomicsplasmidsforthebiologicalcommunity AT mohrstephaniee proteinstructureinitiativematerialrepositoryanopensharedpublicresourceofstructuralgenomicsplasmidsforthebiologicalcommunity AT zuodongmei proteinstructureinitiativematerialrepositoryanopensharedpublicresourceofstructuralgenomicsplasmidsforthebiologicalcommunity AT huyanhui proteinstructureinitiativematerialrepositoryanopensharedpublicresourceofstructuralgenomicsplasmidsforthebiologicalcommunity AT rolfsandreas proteinstructureinitiativematerialrepositoryanopensharedpublicresourceofstructuralgenomicsplasmidsforthebiologicalcommunity AT kramerjason proteinstructureinitiativematerialrepositoryanopensharedpublicresourceofstructuralgenomicsplasmidsforthebiologicalcommunity AT taycherelena proteinstructureinitiativematerialrepositoryanopensharedpublicresourceofstructuralgenomicsplasmidsforthebiologicalcommunity AT kelleyfontina proteinstructureinitiativematerialrepositoryanopensharedpublicresourceofstructuralgenomicsplasmidsforthebiologicalcommunity AT fiaccomichael proteinstructureinitiativematerialrepositoryanopensharedpublicresourceofstructuralgenomicsplasmidsforthebiologicalcommunity AT turnbullgreggory proteinstructureinitiativematerialrepositoryanopensharedpublicresourceofstructuralgenomicsplasmidsforthebiologicalcommunity AT labaerjoshua proteinstructureinitiativematerialrepositoryanopensharedpublicresourceofstructuralgenomicsplasmidsforthebiologicalcommunity |