NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure

The Nearest Neighbor Database (NNDB, http://rna.urmc.rochester.edu/NNDB) is a web-based resource for disseminating parameter sets for predicting nucleic acid secondary structure stabilities. For each set of parameters, the database includes the set of rules with descriptive text, sequence-dependent...

Descripción completa

Detalles Bibliográficos
Autores principales: Turner, Douglas H., Mathews, David H.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2010
Materias:
Articles
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2808915/
https://www.ncbi.nlm.nih.gov/pubmed/19880381
http://dx.doi.org/10.1093/nar/gkp892
_version_ 1782176552643985408
author Turner, Douglas H.
Mathews, David H.
author_facet Turner, Douglas H.
Mathews, David H.
author_sort Turner, Douglas H.
collection PubMed
description The Nearest Neighbor Database (NNDB, http://rna.urmc.rochester.edu/NNDB) is a web-based resource for disseminating parameter sets for predicting nucleic acid secondary structure stabilities. For each set of parameters, the database includes the set of rules with descriptive text, sequence-dependent parameters in plain text and html, literature references to experiments and usage tutorials. The initial release covers parameters for predicting RNA folding free energy and enthalpy changes.
format Text
id pubmed-2808915
institution National Center for Biotechnology Information
language English
publishDate 2010
publisher Oxford University Press
record_format MEDLINE/PubMed
spelling pubmed-28089152010-01-20 NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure Turner, Douglas H. Mathews, David H. Nucleic Acids Res Articles The Nearest Neighbor Database (NNDB, http://rna.urmc.rochester.edu/NNDB) is a web-based resource for disseminating parameter sets for predicting nucleic acid secondary structure stabilities. For each set of parameters, the database includes the set of rules with descriptive text, sequence-dependent parameters in plain text and html, literature references to experiments and usage tutorials. The initial release covers parameters for predicting RNA folding free energy and enthalpy changes. Oxford University Press 2010-01 2009-10-30 /pmc/articles/PMC2808915/ /pubmed/19880381 http://dx.doi.org/10.1093/nar/gkp892 Text en © The Author(s) 2009. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Turner, Douglas H.
Mathews, David H.
NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure
title NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure
title_full NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure
title_fullStr NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure
title_full_unstemmed NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure
title_short NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure
title_sort nndb: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2808915/
https://www.ncbi.nlm.nih.gov/pubmed/19880381
http://dx.doi.org/10.1093/nar/gkp892
work_keys_str_mv AT turnerdouglash nndbthenearestneighborparameterdatabaseforpredictingstabilityofnucleicacidsecondarystructure
AT mathewsdavidh nndbthenearestneighborparameterdatabaseforpredictingstabilityofnucleicacidsecondarystructure

Ejemplares similares