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Archiving next generation sequencing data

Next generation sequencing platforms are producing biological sequencing data in unprecedented amounts. The partners of the International Nucleotide Sequencing Database Collaboration, which includes the National Center for Biotechnology Information (NCBI), the European Bioinformatics Institute (EBI)...

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Detalles Bibliográficos
Autores principales: Shumway, Martin, Cochrane, Guy, Sugawara, Hideaki
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2808927/
https://www.ncbi.nlm.nih.gov/pubmed/19965774
http://dx.doi.org/10.1093/nar/gkp1078
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author Shumway, Martin
Cochrane, Guy
Sugawara, Hideaki
author_facet Shumway, Martin
Cochrane, Guy
Sugawara, Hideaki
author_sort Shumway, Martin
collection PubMed
description Next generation sequencing platforms are producing biological sequencing data in unprecedented amounts. The partners of the International Nucleotide Sequencing Database Collaboration, which includes the National Center for Biotechnology Information (NCBI), the European Bioinformatics Institute (EBI), and the DNA Data Bank of Japan (DDBJ), have established the Sequence Read Archive (SRA) to provide the scientific community with an archival destination for next generation data sets. The SRA is now accessible at http://www.ncbi.nlm.nih.gov/Traces/sra from NCBI, at http://www.ebi.ac.uk/ena from EBI and at http://www.ddbj.nig.ac.jp/sub/trace_sra-e.html from DDBJ. Users of these resources can obtain data sets deposited in any of the three SRA instances. Links and submission instructions are provided.
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spelling pubmed-28089272010-01-20 Archiving next generation sequencing data Shumway, Martin Cochrane, Guy Sugawara, Hideaki Nucleic Acids Res Articles Next generation sequencing platforms are producing biological sequencing data in unprecedented amounts. The partners of the International Nucleotide Sequencing Database Collaboration, which includes the National Center for Biotechnology Information (NCBI), the European Bioinformatics Institute (EBI), and the DNA Data Bank of Japan (DDBJ), have established the Sequence Read Archive (SRA) to provide the scientific community with an archival destination for next generation data sets. The SRA is now accessible at http://www.ncbi.nlm.nih.gov/Traces/sra from NCBI, at http://www.ebi.ac.uk/ena from EBI and at http://www.ddbj.nig.ac.jp/sub/trace_sra-e.html from DDBJ. Users of these resources can obtain data sets deposited in any of the three SRA instances. Links and submission instructions are provided. Oxford University Press 2010-01 2009-12-03 /pmc/articles/PMC2808927/ /pubmed/19965774 http://dx.doi.org/10.1093/nar/gkp1078 Text en Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5/uk/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Shumway, Martin
Cochrane, Guy
Sugawara, Hideaki
Archiving next generation sequencing data
title Archiving next generation sequencing data
title_full Archiving next generation sequencing data
title_fullStr Archiving next generation sequencing data
title_full_unstemmed Archiving next generation sequencing data
title_short Archiving next generation sequencing data
title_sort archiving next generation sequencing data
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2808927/
https://www.ncbi.nlm.nih.gov/pubmed/19965774
http://dx.doi.org/10.1093/nar/gkp1078
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