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New tools at the Candida Genome Database: biochemical pathways and full-text literature search

The Candida Genome Database (CGD, http://www.candidagenome.org/) provides online access to genomic sequence data and manually curated functional information about genes and proteins of the human pathogen Candida albicans. Herein, we describe two recently added features, Candida Biochemical Pathways...

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Detalles Bibliográficos
Autores principales: Skrzypek, Marek S., Arnaud, Martha B., Costanzo, Maria C., Inglis, Diane O., Shah, Prachi, Binkley, Gail, Miyasato, Stuart R., Sherlock, Gavin
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2808937/
https://www.ncbi.nlm.nih.gov/pubmed/19808938
http://dx.doi.org/10.1093/nar/gkp836
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author Skrzypek, Marek S.
Arnaud, Martha B.
Costanzo, Maria C.
Inglis, Diane O.
Shah, Prachi
Binkley, Gail
Miyasato, Stuart R.
Sherlock, Gavin
author_facet Skrzypek, Marek S.
Arnaud, Martha B.
Costanzo, Maria C.
Inglis, Diane O.
Shah, Prachi
Binkley, Gail
Miyasato, Stuart R.
Sherlock, Gavin
author_sort Skrzypek, Marek S.
collection PubMed
description The Candida Genome Database (CGD, http://www.candidagenome.org/) provides online access to genomic sequence data and manually curated functional information about genes and proteins of the human pathogen Candida albicans. Herein, we describe two recently added features, Candida Biochemical Pathways and the Textpresso full-text literature search tool. The Biochemical Pathways tool provides visualization of metabolic pathways and analysis tools that facilitate interpretation of experimental data, including results of large-scale experiments, in the context of Candida metabolism. Textpresso for Candida allows searching through the full-text of Candida-specific literature, including clinical and epidemiological studies.
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spelling pubmed-28089372010-01-20 New tools at the Candida Genome Database: biochemical pathways and full-text literature search Skrzypek, Marek S. Arnaud, Martha B. Costanzo, Maria C. Inglis, Diane O. Shah, Prachi Binkley, Gail Miyasato, Stuart R. Sherlock, Gavin Nucleic Acids Res Articles The Candida Genome Database (CGD, http://www.candidagenome.org/) provides online access to genomic sequence data and manually curated functional information about genes and proteins of the human pathogen Candida albicans. Herein, we describe two recently added features, Candida Biochemical Pathways and the Textpresso full-text literature search tool. The Biochemical Pathways tool provides visualization of metabolic pathways and analysis tools that facilitate interpretation of experimental data, including results of large-scale experiments, in the context of Candida metabolism. Textpresso for Candida allows searching through the full-text of Candida-specific literature, including clinical and epidemiological studies. Oxford University Press 2010-01 2009-10-06 /pmc/articles/PMC2808937/ /pubmed/19808938 http://dx.doi.org/10.1093/nar/gkp836 Text en © The Author(s) 2009. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Skrzypek, Marek S.
Arnaud, Martha B.
Costanzo, Maria C.
Inglis, Diane O.
Shah, Prachi
Binkley, Gail
Miyasato, Stuart R.
Sherlock, Gavin
New tools at the Candida Genome Database: biochemical pathways and full-text literature search
title New tools at the Candida Genome Database: biochemical pathways and full-text literature search
title_full New tools at the Candida Genome Database: biochemical pathways and full-text literature search
title_fullStr New tools at the Candida Genome Database: biochemical pathways and full-text literature search
title_full_unstemmed New tools at the Candida Genome Database: biochemical pathways and full-text literature search
title_short New tools at the Candida Genome Database: biochemical pathways and full-text literature search
title_sort new tools at the candida genome database: biochemical pathways and full-text literature search
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2808937/
https://www.ncbi.nlm.nih.gov/pubmed/19808938
http://dx.doi.org/10.1093/nar/gkp836
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