Cargando…

Xenbase: gene expression and improved integration

Xenbase (www.xenbase.org), the model organism database for Xenopus laevis and X. (Silurana) tropicalis, is the principal centralized resource of genomic, development data and community information for Xenopus research. Recent improvements include the addition of the literature and interaction tabs t...

Descripción completa

Detalles Bibliográficos
Autores principales:	Bowes, Jeff B., Snyder, Kevin A., Segerdell, Erik, Jarabek, Chris J., Azam, Kenan, Zorn, Aaron M., Vize, Peter D.
Formato:	Texto
Lenguaje:	English
Publicado:	Oxford University Press 2010
Materias:	Articles
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2808955/ https://www.ncbi.nlm.nih.gov/pubmed/19884130 http://dx.doi.org/10.1093/nar/gkp953

Ejemplares similares

Xenbase: a Xenopus biology and genomics resource
por: Bowes, Jeff B., et al.
Publicado: (2008)

The Xenbase literature curation process
por: Bowes, Jeff B., et al.
Publicado: (2013)

Xenbase: expansion and updates of the Xenopus model organism database
por: James-Zorn, Christina, et al.
Publicado: (2013)

Enhanced XAO: the ontology of Xenopus anatomy and development underpins more accurate annotation of gene expression and queries on Xenbase
por: Segerdell, Erik, et al.
Publicado: (2013)

Xenbase: Facilitating the Use of Xenopus to Model Human Disease
por: Nenni, Mardi J., et al.
Publicado: (2019)

Xenbase: key features and resources of the Xenopus model organism knowledgebase
por: Fisher, Malcolm, et al.
Publicado: (2023)

Xenbase: a genomic, epigenomic and transcriptomic model organism database
por: Karimi, Kamran, et al.
Publicado: (2018)

Xenbase, the Xenopus model organism database; new virtualized system, data types and genomes
por: Karpinka, J. Brad, et al.
Publicado: (2014)

The Virtual Xenbase: transitioning an online bioinformatics resource to a private cloud
por: Karimi, Kamran, et al.
Publicado: (2014)

Xenbase: deep integration of GEO & SRA RNA-seq and ChIP-seq data in a model organism database
por: Fortriede, Joshua D, et al.
Publicado: (2020)

An ontology for Xenopus anatomy and development
por: Segerdell, Erik, et al.
Publicado: (2008)

Circadian Cycles of Gene Expression in the Coral, Acropora millepora
por: Brady, Aisling K., et al.
Publicado: (2011)

The Xenopus phenotype ontology: bridging model organism phenotype data to human health and development
por: Fisher, Malcolm E., et al.
Publicado: (2022)

Separate Introns Gained within Short and Long Soluble Peridinin-Chlorophyll a-Protein Genes during Radiation of Symbiodinium (Dinophyceae) Clade A and B Lineages
por: Reichman, Jay R., et al.
Publicado: (2014)

Normal Table of Xenopus development: a new graphical resource
por: Zahn, Natalya, et al.
Publicado: (2022)

Integration of 1:1 orthology maps and updated datasets into Echinobase
por: Foley, Saoirse, et al.
Publicado: (2021)

Image Reconstruction Using Small-voxel Size Improves Small Lesion Detection for Positron Emission Tomography
por: Rep, Sebastijan, et al.
Publicado: (2022)

Crowdsourcing Electronic Health Record Improvements at Scale across an Integrated Health Care Delivery System
por: Rajamani, Geetanjali, et al.
Publicado: (2023)

Research resources: curating the new eagle-i discovery system
por: Vasilevsky, Nicole, et al.
Publicado: (2012)

Organizing mechanism-related information on chemical interactions using a framework based on the aggregate exposure and adverse outcome pathways
por: Price, Paul S., et al.
Publicado: (2020)

Uncovering the mesendoderm gene regulatory network through multi-omic data integration
por: Jansen, Camden, et al.
Publicado: (2022)

Embryonic and aglomerular kidney development in the bay pipefish, Syngnathus leptorhynchus
por: Maters, Bianca R., et al.
Publicado: (2022)

Ecological Complexity of Coral Recruitment Processes: Effects of Invertebrate Herbivores on Coral Recruitment and Growth Depends Upon Substratum Properties and Coral Species
por: Davies, Sarah W., et al.
Publicado: (2013)

Integrated analysis of Wnt signalling system component gene expression
por: Murphy, Paula, et al.
Publicado: (2022)

The case for standardizing gene nomenclature in vertebrates
por: McCarthy, Fiona M., et al.
Publicado: (2023)

Can integrating religiosity and spirituality into postpartum care improve the quality of life in women with preeclampsia
por: Rasouli, Robab, et al.
Publicado: (2023)

Improved Shear Strength Prediction Model of Steel Fiber Reinforced Concrete Beams by Adopting Gene Expression Programming
por: Tariq, Moiz, et al.
Publicado: (2022)

Pathway‐extended gene expression signatures integrate novel biomarkers that improve predictions of patient responses to kinase inhibitors
por: Bagchee‐Clark, Ashis J., et al.
Publicado: (2020)

Integrating multiple genome annotation databases improves the interpretation of microarray gene expression data
por: Yin, Jun, et al.
Publicado: (2010)

Sensitivity and fidelity of DNA microarray improved with integration of Amplified Differential Gene Expression (ADGE)
por: Chen, Zhijian J, et al.
Publicado: (2003)

Improved prediction of gene expression through integrating cell signalling models with machine learning
por: Al taweraqi, Nada, et al.
Publicado: (2022)

The Porifera Ontology (PORO): enhancing sponge systematics with an anatomy ontology
por: Thacker, Robert W, et al.
Publicado: (2014)

More are better, but the details matter: combinations of multiple Fresnel zone plates for improved resolution and efficiency in X-ray microscopy
por: Li, Kenan, et al.
Publicado: (2018)

Advances in Inhalation Dosimetry Models and Methods for Occupational Risk Assessment and Exposure Limit Derivation
por: Kuempel, Eileen D., et al.
Publicado: (2015)

Improved Reconstruction of In Silico Gene Regulatory Networks by Integrating Knockout and Perturbation Data
por: Yip, Kevin Y., et al.
Publicado: (2010)

Distinguishing Species Using GC Contents in Mixed DNA or RNA Sequences
por: Karimi, Kamran, et al.
Publicado: (2018)

Suppression of SHROOM1 Improves In Vitro and In Vivo Gene Integration by Promoting Homology-Directed Repair
por: Zhao, Zhihua, et al.
Publicado: (2020)

A new method to remove hybridization bias for interspecies comparison of global gene expression profiles uncovers an association between mRNA sequence divergence and differential gene expression in Xenopus
por: Sartor, Maureen A., et al.
Publicado: (2006)

Integrated analysis of independent gene expression microarray datasets improves the predictability of breast cancer outcome
por: Zhang, Zhe, et al.
Publicado: (2007)

Serial analysis of gene expression (SAGE) in normal human trabecular meshwork
por: Liu, Yutao, et al.
Publicado: (2011)

Cannot write session to /tmp/vufind_sessions/sess_kn9qp78st9mll1uatpjaegkj19