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The integrated microbial genomes system: an expanding comparative analysis resource

The integrated microbial genomes (IMG) system serves as a community resource for comparative analysis of publicly available genomes in a comprehensive integrated context. IMG contains both draft and complete microbial genomes integrated with other publicly available genomes from all three domains of...

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Autores principales: Markowitz, Victor M., Chen, I-Min A., Palaniappan, Krishna, Chu, Ken, Szeto, Ernest, Grechkin, Yuri, Ratner, Anna, Anderson, Iain, Lykidis, Athanasios, Mavromatis, Konstantinos, Ivanova, Natalia N., Kyrpides, Nikos C.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2808961/
https://www.ncbi.nlm.nih.gov/pubmed/19864254
http://dx.doi.org/10.1093/nar/gkp887
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author Markowitz, Victor M.
Chen, I-Min A.
Palaniappan, Krishna
Chu, Ken
Szeto, Ernest
Grechkin, Yuri
Ratner, Anna
Anderson, Iain
Lykidis, Athanasios
Mavromatis, Konstantinos
Ivanova, Natalia N.
Kyrpides, Nikos C.
author_facet Markowitz, Victor M.
Chen, I-Min A.
Palaniappan, Krishna
Chu, Ken
Szeto, Ernest
Grechkin, Yuri
Ratner, Anna
Anderson, Iain
Lykidis, Athanasios
Mavromatis, Konstantinos
Ivanova, Natalia N.
Kyrpides, Nikos C.
author_sort Markowitz, Victor M.
collection PubMed
description The integrated microbial genomes (IMG) system serves as a community resource for comparative analysis of publicly available genomes in a comprehensive integrated context. IMG contains both draft and complete microbial genomes integrated with other publicly available genomes from all three domains of life, together with a large number of plasmids and viruses. IMG provides tools and viewers for analyzing and reviewing the annotations of genes and genomes in a comparative context. Since its first release in 2005, IMG’s data content and analytical capabilities have been constantly expanded through regular releases. Several companion IMG systems have been set up in order to serve domain specific needs, such as expert review of genome annotations. IMG is available at http://img.jgi.doe.gov.
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spelling pubmed-28089612010-01-20 The integrated microbial genomes system: an expanding comparative analysis resource Markowitz, Victor M. Chen, I-Min A. Palaniappan, Krishna Chu, Ken Szeto, Ernest Grechkin, Yuri Ratner, Anna Anderson, Iain Lykidis, Athanasios Mavromatis, Konstantinos Ivanova, Natalia N. Kyrpides, Nikos C. Nucleic Acids Res Articles The integrated microbial genomes (IMG) system serves as a community resource for comparative analysis of publicly available genomes in a comprehensive integrated context. IMG contains both draft and complete microbial genomes integrated with other publicly available genomes from all three domains of life, together with a large number of plasmids and viruses. IMG provides tools and viewers for analyzing and reviewing the annotations of genes and genomes in a comparative context. Since its first release in 2005, IMG’s data content and analytical capabilities have been constantly expanded through regular releases. Several companion IMG systems have been set up in order to serve domain specific needs, such as expert review of genome annotations. IMG is available at http://img.jgi.doe.gov. Oxford University Press 2010-01 2009-10-28 /pmc/articles/PMC2808961/ /pubmed/19864254 http://dx.doi.org/10.1093/nar/gkp887 Text en © The Author(s) 2009. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Markowitz, Victor M.
Chen, I-Min A.
Palaniappan, Krishna
Chu, Ken
Szeto, Ernest
Grechkin, Yuri
Ratner, Anna
Anderson, Iain
Lykidis, Athanasios
Mavromatis, Konstantinos
Ivanova, Natalia N.
Kyrpides, Nikos C.
The integrated microbial genomes system: an expanding comparative analysis resource
title The integrated microbial genomes system: an expanding comparative analysis resource
title_full The integrated microbial genomes system: an expanding comparative analysis resource
title_fullStr The integrated microbial genomes system: an expanding comparative analysis resource
title_full_unstemmed The integrated microbial genomes system: an expanding comparative analysis resource
title_short The integrated microbial genomes system: an expanding comparative analysis resource
title_sort integrated microbial genomes system: an expanding comparative analysis resource
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2808961/
https://www.ncbi.nlm.nih.gov/pubmed/19864254
http://dx.doi.org/10.1093/nar/gkp887
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