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Towards Robot Scientists for autonomous scientific discovery

We review the main components of autonomous scientific discovery, and how they lead to the concept of a Robot Scientist. This is a system which uses techniques from artificial intelligence to automate all aspects of the scientific discovery process: it generates hypotheses from a computer model of t...

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Autores principales: Sparkes, Andrew, Aubrey, Wayne, Byrne, Emma, Clare, Amanda, Khan, Muhammed N, Liakata, Maria, Markham, Magdalena, Rowland, Jem, Soldatova, Larisa N, Whelan, Kenneth E, Young, Michael, King, Ross D
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2813846/
https://www.ncbi.nlm.nih.gov/pubmed/20119518
http://dx.doi.org/10.1186/1759-4499-2-1
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author Sparkes, Andrew
Aubrey, Wayne
Byrne, Emma
Clare, Amanda
Khan, Muhammed N
Liakata, Maria
Markham, Magdalena
Rowland, Jem
Soldatova, Larisa N
Whelan, Kenneth E
Young, Michael
King, Ross D
author_facet Sparkes, Andrew
Aubrey, Wayne
Byrne, Emma
Clare, Amanda
Khan, Muhammed N
Liakata, Maria
Markham, Magdalena
Rowland, Jem
Soldatova, Larisa N
Whelan, Kenneth E
Young, Michael
King, Ross D
author_sort Sparkes, Andrew
collection PubMed
description We review the main components of autonomous scientific discovery, and how they lead to the concept of a Robot Scientist. This is a system which uses techniques from artificial intelligence to automate all aspects of the scientific discovery process: it generates hypotheses from a computer model of the domain, designs experiments to test these hypotheses, runs the physical experiments using robotic systems, analyses and interprets the resulting data, and repeats the cycle. We describe our two prototype Robot Scientists: Adam and Eve. Adam has recently proven the potential of such systems by identifying twelve genes responsible for catalysing specific reactions in the metabolic pathways of the yeast Saccharomyces cerevisiae. This work has been formally recorded in great detail using logic. We argue that the reporting of science needs to become fully formalised and that Robot Scientists can help achieve this. This will make scientific information more reproducible and reusable, and promote the integration of computers in scientific reasoning. We believe the greater automation of both the physical and intellectual aspects of scientific investigations to be essential to the future of science. Greater automation improves the accuracy and reliability of experiments, increases the pace of discovery and, in common with conventional laboratory automation, removes tedious and repetitive tasks from the human scientist.
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spelling pubmed-28138462010-01-30 Towards Robot Scientists for autonomous scientific discovery Sparkes, Andrew Aubrey, Wayne Byrne, Emma Clare, Amanda Khan, Muhammed N Liakata, Maria Markham, Magdalena Rowland, Jem Soldatova, Larisa N Whelan, Kenneth E Young, Michael King, Ross D Autom Exp Review We review the main components of autonomous scientific discovery, and how they lead to the concept of a Robot Scientist. This is a system which uses techniques from artificial intelligence to automate all aspects of the scientific discovery process: it generates hypotheses from a computer model of the domain, designs experiments to test these hypotheses, runs the physical experiments using robotic systems, analyses and interprets the resulting data, and repeats the cycle. We describe our two prototype Robot Scientists: Adam and Eve. Adam has recently proven the potential of such systems by identifying twelve genes responsible for catalysing specific reactions in the metabolic pathways of the yeast Saccharomyces cerevisiae. This work has been formally recorded in great detail using logic. We argue that the reporting of science needs to become fully formalised and that Robot Scientists can help achieve this. This will make scientific information more reproducible and reusable, and promote the integration of computers in scientific reasoning. We believe the greater automation of both the physical and intellectual aspects of scientific investigations to be essential to the future of science. Greater automation improves the accuracy and reliability of experiments, increases the pace of discovery and, in common with conventional laboratory automation, removes tedious and repetitive tasks from the human scientist. BioMed Central 2010-01-04 /pmc/articles/PMC2813846/ /pubmed/20119518 http://dx.doi.org/10.1186/1759-4499-2-1 Text en Copyright ©2010 Sparkes et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Review
Sparkes, Andrew
Aubrey, Wayne
Byrne, Emma
Clare, Amanda
Khan, Muhammed N
Liakata, Maria
Markham, Magdalena
Rowland, Jem
Soldatova, Larisa N
Whelan, Kenneth E
Young, Michael
King, Ross D
Towards Robot Scientists for autonomous scientific discovery
title Towards Robot Scientists for autonomous scientific discovery
title_full Towards Robot Scientists for autonomous scientific discovery
title_fullStr Towards Robot Scientists for autonomous scientific discovery
title_full_unstemmed Towards Robot Scientists for autonomous scientific discovery
title_short Towards Robot Scientists for autonomous scientific discovery
title_sort towards robot scientists for autonomous scientific discovery
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2813846/
https://www.ncbi.nlm.nih.gov/pubmed/20119518
http://dx.doi.org/10.1186/1759-4499-2-1
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