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No evidence for competition between cytotoxic T-lymphocyte responses in HIV-1 infection

Strong competition between cytotoxic T-lymphocytes (CTLs) specific for different epitopes in human immunodeficiency virus (HIV) infection would have important implications for the design of an HIV vaccine. To investigate evidence for this type of competition, we analysed CTL response data from 97 pa...

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Detalles Bibliográficos
Autores principales: Fryer, Helen R., Scherer, Almut, Oxenius, Annette, Phillips, Rodney, McLean, Angela R.
Formato: Texto
Lenguaje:English
Publicado: The Royal Society 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2817101/
https://www.ncbi.nlm.nih.gov/pubmed/19776069
http://dx.doi.org/10.1098/rspb.2009.1232
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author Fryer, Helen R.
Scherer, Almut
Oxenius, Annette
Phillips, Rodney
McLean, Angela R.
author_facet Fryer, Helen R.
Scherer, Almut
Oxenius, Annette
Phillips, Rodney
McLean, Angela R.
author_sort Fryer, Helen R.
collection PubMed
description Strong competition between cytotoxic T-lymphocytes (CTLs) specific for different epitopes in human immunodeficiency virus (HIV) infection would have important implications for the design of an HIV vaccine. To investigate evidence for this type of competition, we analysed CTL response data from 97 patients with chronic HIV infection who were frequently sampled for up to 96 weeks. For each sample, CTL responses directed against a range of known epitopes in gag, pol and nef were measured using an enzyme-linked immunospot assay. The Lotka–Volterra model of competition was used to predict patterns that would be expected from these data if competitive interactions materially affect CTL numbers. In this application, the model predicts that when hosts make responses to a larger number of epitopes, they would have diminished responses to each epitope and that if one epitope-specific response becomes dramatically smaller, others would increase in size to compensate; conversely if one response grows, others would shrink. Analysis of the experimental data reveals results that are wholly inconsistent with these predictions. In hosts who respond to more epitopes, the average epitope-specific response tends to be larger, not smaller. Furthermore, responses to different epitopes almost always increase in unison or decrease in unison. Our findings are therefore inconsistent with the hypothesis that there is competition between CTL responses directed against different epitopes in HIV infection. This suggests that vaccines that elicit broad responses would be favourable because they would direct a larger total response against the virus, in addition to being more robust to the effects of CTL escape.
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spelling pubmed-28171012010-02-22 No evidence for competition between cytotoxic T-lymphocyte responses in HIV-1 infection Fryer, Helen R. Scherer, Almut Oxenius, Annette Phillips, Rodney McLean, Angela R. Proc Biol Sci Research articles Strong competition between cytotoxic T-lymphocytes (CTLs) specific for different epitopes in human immunodeficiency virus (HIV) infection would have important implications for the design of an HIV vaccine. To investigate evidence for this type of competition, we analysed CTL response data from 97 patients with chronic HIV infection who were frequently sampled for up to 96 weeks. For each sample, CTL responses directed against a range of known epitopes in gag, pol and nef were measured using an enzyme-linked immunospot assay. The Lotka–Volterra model of competition was used to predict patterns that would be expected from these data if competitive interactions materially affect CTL numbers. In this application, the model predicts that when hosts make responses to a larger number of epitopes, they would have diminished responses to each epitope and that if one epitope-specific response becomes dramatically smaller, others would increase in size to compensate; conversely if one response grows, others would shrink. Analysis of the experimental data reveals results that are wholly inconsistent with these predictions. In hosts who respond to more epitopes, the average epitope-specific response tends to be larger, not smaller. Furthermore, responses to different epitopes almost always increase in unison or decrease in unison. Our findings are therefore inconsistent with the hypothesis that there is competition between CTL responses directed against different epitopes in HIV infection. This suggests that vaccines that elicit broad responses would be favourable because they would direct a larger total response against the virus, in addition to being more robust to the effects of CTL escape. The Royal Society 2009-12-22 2009-09-23 /pmc/articles/PMC2817101/ /pubmed/19776069 http://dx.doi.org/10.1098/rspb.2009.1232 Text en © 2009 The Royal Society http://creativecommons.org/licenses/by/2.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research articles
Fryer, Helen R.
Scherer, Almut
Oxenius, Annette
Phillips, Rodney
McLean, Angela R.
No evidence for competition between cytotoxic T-lymphocyte responses in HIV-1 infection
title No evidence for competition between cytotoxic T-lymphocyte responses in HIV-1 infection
title_full No evidence for competition between cytotoxic T-lymphocyte responses in HIV-1 infection
title_fullStr No evidence for competition between cytotoxic T-lymphocyte responses in HIV-1 infection
title_full_unstemmed No evidence for competition between cytotoxic T-lymphocyte responses in HIV-1 infection
title_short No evidence for competition between cytotoxic T-lymphocyte responses in HIV-1 infection
title_sort no evidence for competition between cytotoxic t-lymphocyte responses in hiv-1 infection
topic Research articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2817101/
https://www.ncbi.nlm.nih.gov/pubmed/19776069
http://dx.doi.org/10.1098/rspb.2009.1232
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