Cargando…

Transcriptome analysis of the sex pheromone gland of the noctuid moth Heliothis virescens

BACKGROUND: The chemical components of sex pheromones have been determined for more than a thousand moth species, but so far only a handful of genes encoding enzymes responsible for the biosynthesis of these compounds have been identified. For understanding the evolution of moth sexual communication...

Descripción completa

Detalles Bibliográficos
Autores principales: Vogel, Heiko, Heidel, Andrew J, Heckel, David G, Groot, Astrid T
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2820457/
https://www.ncbi.nlm.nih.gov/pubmed/20074338
http://dx.doi.org/10.1186/1471-2164-11-29
_version_ 1782177373231251456
author Vogel, Heiko
Heidel, Andrew J
Heckel, David G
Groot, Astrid T
author_facet Vogel, Heiko
Heidel, Andrew J
Heckel, David G
Groot, Astrid T
author_sort Vogel, Heiko
collection PubMed
description BACKGROUND: The chemical components of sex pheromones have been determined for more than a thousand moth species, but so far only a handful of genes encoding enzymes responsible for the biosynthesis of these compounds have been identified. For understanding the evolution of moth sexual communication, it is essential to know which genes are involved in the production of specific pheromone components and what controls the variation in their relative frequencies in the pheromone blend. We used a transcriptomic approach to characterize the pheromone gland of the Noctuid moth Heliothis virescens, an important agricultural pest, in order to obtain substantial general sequence information and to identify a range of candidate genes involved in the pheromone biosynthetic pathway. RESULTS: To facilitate identifying sets of genes involved in a broad range of processes and to capture rare transcripts, we developed our majority of ESTs from a normalized cDNA library of Heliothis virescens pheromone glands (PG). Combining these with a non-normalized library yielded a total of 17,233 ESTs, which assembled into 2,082 contigs and 6,228 singletons. Using BLAST searches of the NR and Swissprot databases we were able to identify a large number of putative unique gene elements (unigenes), which we compared to those derived from previous transcriptomic surveys of the larval stage of Heliothis virescens. The distribution of unigenes among GO Biological Process functional groups shows an overall similarity between PG and larval transcriptomes, but with distinct enrichment of specific pathways in the PG. In addition, we identified a large number of candidate genes in the pheromone biosynthetic pathways. CONCLUSION: These data constitute one of the first large-scale EST-projects for Noctuidae, a much-needed resource for exploring these pest species. Our analysis shows a surprisingly complex transcriptome and we identified a large number of potential pheromone biosynthetic pathway and immune-related genes that can be applied to population and systematic studies of Heliothis virescens and other Noctuidae.
format Text
id pubmed-2820457
institution National Center for Biotechnology Information
language English
publishDate 2010
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-28204572010-02-12 Transcriptome analysis of the sex pheromone gland of the noctuid moth Heliothis virescens Vogel, Heiko Heidel, Andrew J Heckel, David G Groot, Astrid T BMC Genomics Research Article BACKGROUND: The chemical components of sex pheromones have been determined for more than a thousand moth species, but so far only a handful of genes encoding enzymes responsible for the biosynthesis of these compounds have been identified. For understanding the evolution of moth sexual communication, it is essential to know which genes are involved in the production of specific pheromone components and what controls the variation in their relative frequencies in the pheromone blend. We used a transcriptomic approach to characterize the pheromone gland of the Noctuid moth Heliothis virescens, an important agricultural pest, in order to obtain substantial general sequence information and to identify a range of candidate genes involved in the pheromone biosynthetic pathway. RESULTS: To facilitate identifying sets of genes involved in a broad range of processes and to capture rare transcripts, we developed our majority of ESTs from a normalized cDNA library of Heliothis virescens pheromone glands (PG). Combining these with a non-normalized library yielded a total of 17,233 ESTs, which assembled into 2,082 contigs and 6,228 singletons. Using BLAST searches of the NR and Swissprot databases we were able to identify a large number of putative unique gene elements (unigenes), which we compared to those derived from previous transcriptomic surveys of the larval stage of Heliothis virescens. The distribution of unigenes among GO Biological Process functional groups shows an overall similarity between PG and larval transcriptomes, but with distinct enrichment of specific pathways in the PG. In addition, we identified a large number of candidate genes in the pheromone biosynthetic pathways. CONCLUSION: These data constitute one of the first large-scale EST-projects for Noctuidae, a much-needed resource for exploring these pest species. Our analysis shows a surprisingly complex transcriptome and we identified a large number of potential pheromone biosynthetic pathway and immune-related genes that can be applied to population and systematic studies of Heliothis virescens and other Noctuidae. BioMed Central 2010-01-14 /pmc/articles/PMC2820457/ /pubmed/20074338 http://dx.doi.org/10.1186/1471-2164-11-29 Text en Copyright ©2010 Vogel et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Vogel, Heiko
Heidel, Andrew J
Heckel, David G
Groot, Astrid T
Transcriptome analysis of the sex pheromone gland of the noctuid moth Heliothis virescens
title Transcriptome analysis of the sex pheromone gland of the noctuid moth Heliothis virescens
title_full Transcriptome analysis of the sex pheromone gland of the noctuid moth Heliothis virescens
title_fullStr Transcriptome analysis of the sex pheromone gland of the noctuid moth Heliothis virescens
title_full_unstemmed Transcriptome analysis of the sex pheromone gland of the noctuid moth Heliothis virescens
title_short Transcriptome analysis of the sex pheromone gland of the noctuid moth Heliothis virescens
title_sort transcriptome analysis of the sex pheromone gland of the noctuid moth heliothis virescens
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2820457/
https://www.ncbi.nlm.nih.gov/pubmed/20074338
http://dx.doi.org/10.1186/1471-2164-11-29
work_keys_str_mv AT vogelheiko transcriptomeanalysisofthesexpheromoneglandofthenoctuidmothheliothisvirescens
AT heidelandrewj transcriptomeanalysisofthesexpheromoneglandofthenoctuidmothheliothisvirescens
AT heckeldavidg transcriptomeanalysisofthesexpheromoneglandofthenoctuidmothheliothisvirescens
AT grootastridt transcriptomeanalysisofthesexpheromoneglandofthenoctuidmothheliothisvirescens