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Association of MMP - 12 polymorphisms with severe and very severe COPD: A case control study of MMPs - 1, 9 and 12 in a European population
BACKGROUND: Genetic factors play a role in chronic obstructive pulmonary disease (COPD) but are poorly understood. A number of candidate genes have been proposed on the basis of the pathogenesis of COPD. These include the matrix metalloproteinase (MMP) genes which play a role in tissue remodelling a...
Autores principales: | , , , , , , , , , , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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BioMed Central
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2820470/ https://www.ncbi.nlm.nih.gov/pubmed/20078883 http://dx.doi.org/10.1186/1471-2350-11-7 |
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author | Haq, Imran Chappell, Sally Johnson, Simon R Lotya, Juzer Daly, Leslie Morgan, Kevin Guetta-Baranes, Tamar Roca, Josep Rabinovich, Roberto Millar, Ann B Donnelly, Seamas C Keatings, Vera MacNee, William Stolk, Jan Hiemstra, Pieter S Miniati, Massimo Monti, Simonetta O'Connor, Clare M Kalsheker, Noor |
author_facet | Haq, Imran Chappell, Sally Johnson, Simon R Lotya, Juzer Daly, Leslie Morgan, Kevin Guetta-Baranes, Tamar Roca, Josep Rabinovich, Roberto Millar, Ann B Donnelly, Seamas C Keatings, Vera MacNee, William Stolk, Jan Hiemstra, Pieter S Miniati, Massimo Monti, Simonetta O'Connor, Clare M Kalsheker, Noor |
author_sort | Haq, Imran |
collection | PubMed |
description | BACKGROUND: Genetic factors play a role in chronic obstructive pulmonary disease (COPD) but are poorly understood. A number of candidate genes have been proposed on the basis of the pathogenesis of COPD. These include the matrix metalloproteinase (MMP) genes which play a role in tissue remodelling and fit in with the protease - antiprotease imbalance theory for the cause of COPD. Previous genetic studies of MMPs in COPD have had inadequate coverage of the genes, and have reported conflicting associations of both single nucleotide polymorphisms (SNPs) and SNP haplotypes, plausibly due to under-powered studies. METHODS: To address these issues we genotyped 26 SNPs, providing comprehensive coverage of reported SNP variation, in MMPs- 1, 9 and 12 from 977 COPD patients and 876 non-diseased smokers of European descent and evaluated their association with disease singly and in haplotype combinations. We used logistic regression to adjust for age, gender, centre and smoking history. RESULTS: Haplotypes of two SNPs in MMP-12 (rs652438 and rs2276109), showed an association with severe/very severe disease, corresponding to GOLD Stages III and IV. CONCLUSIONS: Those with the common A-A haplotype for these two SNPs were at greater risk of developing severe/very severe disease (p = 0.0039) while possession of the minor G variants at either SNP locus had a protective effect (adjusted odds ratio of 0.76; 95% CI 0.61 - 0.94). The A-A haplotype was also associated with significantly lower predicted FEV(1 )(42.62% versus 44.79%; p = 0.0129). This implicates haplotypes of MMP-12 as modifiers of disease severity. |
format | Text |
id | pubmed-2820470 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-28204702010-02-12 Association of MMP - 12 polymorphisms with severe and very severe COPD: A case control study of MMPs - 1, 9 and 12 in a European population Haq, Imran Chappell, Sally Johnson, Simon R Lotya, Juzer Daly, Leslie Morgan, Kevin Guetta-Baranes, Tamar Roca, Josep Rabinovich, Roberto Millar, Ann B Donnelly, Seamas C Keatings, Vera MacNee, William Stolk, Jan Hiemstra, Pieter S Miniati, Massimo Monti, Simonetta O'Connor, Clare M Kalsheker, Noor BMC Med Genet Research Article BACKGROUND: Genetic factors play a role in chronic obstructive pulmonary disease (COPD) but are poorly understood. A number of candidate genes have been proposed on the basis of the pathogenesis of COPD. These include the matrix metalloproteinase (MMP) genes which play a role in tissue remodelling and fit in with the protease - antiprotease imbalance theory for the cause of COPD. Previous genetic studies of MMPs in COPD have had inadequate coverage of the genes, and have reported conflicting associations of both single nucleotide polymorphisms (SNPs) and SNP haplotypes, plausibly due to under-powered studies. METHODS: To address these issues we genotyped 26 SNPs, providing comprehensive coverage of reported SNP variation, in MMPs- 1, 9 and 12 from 977 COPD patients and 876 non-diseased smokers of European descent and evaluated their association with disease singly and in haplotype combinations. We used logistic regression to adjust for age, gender, centre and smoking history. RESULTS: Haplotypes of two SNPs in MMP-12 (rs652438 and rs2276109), showed an association with severe/very severe disease, corresponding to GOLD Stages III and IV. CONCLUSIONS: Those with the common A-A haplotype for these two SNPs were at greater risk of developing severe/very severe disease (p = 0.0039) while possession of the minor G variants at either SNP locus had a protective effect (adjusted odds ratio of 0.76; 95% CI 0.61 - 0.94). The A-A haplotype was also associated with significantly lower predicted FEV(1 )(42.62% versus 44.79%; p = 0.0129). This implicates haplotypes of MMP-12 as modifiers of disease severity. BioMed Central 2010-01-15 /pmc/articles/PMC2820470/ /pubmed/20078883 http://dx.doi.org/10.1186/1471-2350-11-7 Text en Copyright ©2010 Haq et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Haq, Imran Chappell, Sally Johnson, Simon R Lotya, Juzer Daly, Leslie Morgan, Kevin Guetta-Baranes, Tamar Roca, Josep Rabinovich, Roberto Millar, Ann B Donnelly, Seamas C Keatings, Vera MacNee, William Stolk, Jan Hiemstra, Pieter S Miniati, Massimo Monti, Simonetta O'Connor, Clare M Kalsheker, Noor Association of MMP - 12 polymorphisms with severe and very severe COPD: A case control study of MMPs - 1, 9 and 12 in a European population |
title | Association of MMP - 12 polymorphisms with severe and very severe COPD: A case control study of MMPs - 1, 9 and 12 in a European population |
title_full | Association of MMP - 12 polymorphisms with severe and very severe COPD: A case control study of MMPs - 1, 9 and 12 in a European population |
title_fullStr | Association of MMP - 12 polymorphisms with severe and very severe COPD: A case control study of MMPs - 1, 9 and 12 in a European population |
title_full_unstemmed | Association of MMP - 12 polymorphisms with severe and very severe COPD: A case control study of MMPs - 1, 9 and 12 in a European population |
title_short | Association of MMP - 12 polymorphisms with severe and very severe COPD: A case control study of MMPs - 1, 9 and 12 in a European population |
title_sort | association of mmp - 12 polymorphisms with severe and very severe copd: a case control study of mmps - 1, 9 and 12 in a european population |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2820470/ https://www.ncbi.nlm.nih.gov/pubmed/20078883 http://dx.doi.org/10.1186/1471-2350-11-7 |
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