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Identifying Prototypical Components in Behaviour Using Clustering Algorithms

Quantitative analysis of animal behaviour is a requirement to understand the task solving strategies of animals and the underlying control mechanisms. The identification of repeatedly occurring behavioural components is thereby a key element of a structured quantitative description. However, the com...

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Detalles Bibliográficos
Autores principales: Braun, Elke, Geurten, Bart, Egelhaaf, Martin
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2825265/
https://www.ncbi.nlm.nih.gov/pubmed/20179763
http://dx.doi.org/10.1371/journal.pone.0009361
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author Braun, Elke
Geurten, Bart
Egelhaaf, Martin
author_facet Braun, Elke
Geurten, Bart
Egelhaaf, Martin
author_sort Braun, Elke
collection PubMed
description Quantitative analysis of animal behaviour is a requirement to understand the task solving strategies of animals and the underlying control mechanisms. The identification of repeatedly occurring behavioural components is thereby a key element of a structured quantitative description. However, the complexity of most behaviours makes the identification of such behavioural components a challenging problem. We propose an automatic and objective approach for determining and evaluating prototypical behavioural components. Behavioural prototypes are identified using clustering algorithms and finally evaluated with respect to their ability to represent the whole behavioural data set. The prototypes allow for a meaningful segmentation of behavioural sequences. We applied our clustering approach to identify prototypical movements of the head of blowflies during cruising flight. The results confirm the previously established saccadic gaze strategy by the set of prototypes being divided into either predominantly translational or rotational movements, respectively. The prototypes reveal additional details about the saccadic and intersaccadic flight sections that could not be unravelled so far. Successful application of the proposed approach to behavioural data shows its ability to automatically identify prototypical behavioural components within a large and noisy database and to evaluate these with respect to their quality and stability. Hence, this approach might be applied to a broad range of behavioural and neural data obtained from different animals and in different contexts.
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spelling pubmed-28252652010-02-24 Identifying Prototypical Components in Behaviour Using Clustering Algorithms Braun, Elke Geurten, Bart Egelhaaf, Martin PLoS One Research Article Quantitative analysis of animal behaviour is a requirement to understand the task solving strategies of animals and the underlying control mechanisms. The identification of repeatedly occurring behavioural components is thereby a key element of a structured quantitative description. However, the complexity of most behaviours makes the identification of such behavioural components a challenging problem. We propose an automatic and objective approach for determining and evaluating prototypical behavioural components. Behavioural prototypes are identified using clustering algorithms and finally evaluated with respect to their ability to represent the whole behavioural data set. The prototypes allow for a meaningful segmentation of behavioural sequences. We applied our clustering approach to identify prototypical movements of the head of blowflies during cruising flight. The results confirm the previously established saccadic gaze strategy by the set of prototypes being divided into either predominantly translational or rotational movements, respectively. The prototypes reveal additional details about the saccadic and intersaccadic flight sections that could not be unravelled so far. Successful application of the proposed approach to behavioural data shows its ability to automatically identify prototypical behavioural components within a large and noisy database and to evaluate these with respect to their quality and stability. Hence, this approach might be applied to a broad range of behavioural and neural data obtained from different animals and in different contexts. Public Library of Science 2010-02-22 /pmc/articles/PMC2825265/ /pubmed/20179763 http://dx.doi.org/10.1371/journal.pone.0009361 Text en Braun et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Braun, Elke
Geurten, Bart
Egelhaaf, Martin
Identifying Prototypical Components in Behaviour Using Clustering Algorithms
title Identifying Prototypical Components in Behaviour Using Clustering Algorithms
title_full Identifying Prototypical Components in Behaviour Using Clustering Algorithms
title_fullStr Identifying Prototypical Components in Behaviour Using Clustering Algorithms
title_full_unstemmed Identifying Prototypical Components in Behaviour Using Clustering Algorithms
title_short Identifying Prototypical Components in Behaviour Using Clustering Algorithms
title_sort identifying prototypical components in behaviour using clustering algorithms
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2825265/
https://www.ncbi.nlm.nih.gov/pubmed/20179763
http://dx.doi.org/10.1371/journal.pone.0009361
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