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Structure, Function, and Evolution of the Thiomonas spp. Genome
Bacteria of the Thiomonas genus are ubiquitous in extreme environments, such as arsenic-rich acid mine drainage (AMD). The genome of one of these strains, Thiomonas sp. 3As, was sequenced, annotated, and examined, revealing specific adaptations allowing this bacterium to survive and grow in its high...
| Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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| Formato: | Texto |
| Lenguaje: | English |
| Publicado: |
Public Library of Science
2010
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2829063/ https://www.ncbi.nlm.nih.gov/pubmed/20195515 http://dx.doi.org/10.1371/journal.pgen.1000859 |
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| author | Arsène-Ploetze, Florence Koechler, Sandrine Marchal, Marie Coppée, Jean-Yves Chandler, Michael Bonnefoy, Violaine Brochier-Armanet, Céline Barakat, Mohamed Barbe, Valérie Battaglia-Brunet, Fabienne Bruneel, Odile Bryan, Christopher G. Cleiss-Arnold, Jessica Cruveiller, Stéphane Erhardt, Mathieu Heinrich-Salmeron, Audrey Hommais, Florence Joulian, Catherine Krin, Evelyne Lieutaud, Aurélie Lièvremont, Didier Michel, Caroline Muller, Daniel Ortet, Philippe Proux, Caroline Siguier, Patricia Roche, David Rouy, Zoé Salvignol, Grégory Slyemi, Djamila Talla, Emmanuel Weiss, Stéphanie Weissenbach, Jean Médigue, Claudine Bertin, Philippe N. |
| author_facet | Arsène-Ploetze, Florence Koechler, Sandrine Marchal, Marie Coppée, Jean-Yves Chandler, Michael Bonnefoy, Violaine Brochier-Armanet, Céline Barakat, Mohamed Barbe, Valérie Battaglia-Brunet, Fabienne Bruneel, Odile Bryan, Christopher G. Cleiss-Arnold, Jessica Cruveiller, Stéphane Erhardt, Mathieu Heinrich-Salmeron, Audrey Hommais, Florence Joulian, Catherine Krin, Evelyne Lieutaud, Aurélie Lièvremont, Didier Michel, Caroline Muller, Daniel Ortet, Philippe Proux, Caroline Siguier, Patricia Roche, David Rouy, Zoé Salvignol, Grégory Slyemi, Djamila Talla, Emmanuel Weiss, Stéphanie Weissenbach, Jean Médigue, Claudine Bertin, Philippe N. |
| author_sort | Arsène-Ploetze, Florence |
| collection | PubMed |
| description | Bacteria of the Thiomonas genus are ubiquitous in extreme environments, such as arsenic-rich acid mine drainage (AMD). The genome of one of these strains, Thiomonas sp. 3As, was sequenced, annotated, and examined, revealing specific adaptations allowing this bacterium to survive and grow in its highly toxic environment. In order to explore genomic diversity as well as genetic evolution in Thiomonas spp., a comparative genomic hybridization (CGH) approach was used on eight different strains of the Thiomonas genus, including five strains of the same species. Our results suggest that the Thiomonas genome has evolved through the gain or loss of genomic islands and that this evolution is influenced by the specific environmental conditions in which the strains live. |
| format | Text |
| id | pubmed-2829063 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2010 |
| publisher | Public Library of Science |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-28290632010-03-02 Structure, Function, and Evolution of the Thiomonas spp. Genome Arsène-Ploetze, Florence Koechler, Sandrine Marchal, Marie Coppée, Jean-Yves Chandler, Michael Bonnefoy, Violaine Brochier-Armanet, Céline Barakat, Mohamed Barbe, Valérie Battaglia-Brunet, Fabienne Bruneel, Odile Bryan, Christopher G. Cleiss-Arnold, Jessica Cruveiller, Stéphane Erhardt, Mathieu Heinrich-Salmeron, Audrey Hommais, Florence Joulian, Catherine Krin, Evelyne Lieutaud, Aurélie Lièvremont, Didier Michel, Caroline Muller, Daniel Ortet, Philippe Proux, Caroline Siguier, Patricia Roche, David Rouy, Zoé Salvignol, Grégory Slyemi, Djamila Talla, Emmanuel Weiss, Stéphanie Weissenbach, Jean Médigue, Claudine Bertin, Philippe N. PLoS Genet Research Article Bacteria of the Thiomonas genus are ubiquitous in extreme environments, such as arsenic-rich acid mine drainage (AMD). The genome of one of these strains, Thiomonas sp. 3As, was sequenced, annotated, and examined, revealing specific adaptations allowing this bacterium to survive and grow in its highly toxic environment. In order to explore genomic diversity as well as genetic evolution in Thiomonas spp., a comparative genomic hybridization (CGH) approach was used on eight different strains of the Thiomonas genus, including five strains of the same species. Our results suggest that the Thiomonas genome has evolved through the gain or loss of genomic islands and that this evolution is influenced by the specific environmental conditions in which the strains live. Public Library of Science 2010-02-26 /pmc/articles/PMC2829063/ /pubmed/20195515 http://dx.doi.org/10.1371/journal.pgen.1000859 Text en Arsène-Ploetze et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
| spellingShingle | Research Article Arsène-Ploetze, Florence Koechler, Sandrine Marchal, Marie Coppée, Jean-Yves Chandler, Michael Bonnefoy, Violaine Brochier-Armanet, Céline Barakat, Mohamed Barbe, Valérie Battaglia-Brunet, Fabienne Bruneel, Odile Bryan, Christopher G. Cleiss-Arnold, Jessica Cruveiller, Stéphane Erhardt, Mathieu Heinrich-Salmeron, Audrey Hommais, Florence Joulian, Catherine Krin, Evelyne Lieutaud, Aurélie Lièvremont, Didier Michel, Caroline Muller, Daniel Ortet, Philippe Proux, Caroline Siguier, Patricia Roche, David Rouy, Zoé Salvignol, Grégory Slyemi, Djamila Talla, Emmanuel Weiss, Stéphanie Weissenbach, Jean Médigue, Claudine Bertin, Philippe N. Structure, Function, and Evolution of the Thiomonas spp. Genome |
| title | Structure, Function, and Evolution of the Thiomonas spp. Genome |
| title_full | Structure, Function, and Evolution of the Thiomonas spp. Genome |
| title_fullStr | Structure, Function, and Evolution of the Thiomonas spp. Genome |
| title_full_unstemmed | Structure, Function, and Evolution of the Thiomonas spp. Genome |
| title_short | Structure, Function, and Evolution of the Thiomonas spp. Genome |
| title_sort | structure, function, and evolution of the thiomonas spp. genome |
| topic | Research Article |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2829063/ https://www.ncbi.nlm.nih.gov/pubmed/20195515 http://dx.doi.org/10.1371/journal.pgen.1000859 |
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