Cargando…
A simple and rapid method for detection of Goose Parvovirus in the field by loop-mediated isothermal amplification
BACKGROUND: Goose parvovirus (GPV) is a Dependovirus associated with latent infection and mortality in geese. Currently, in a worldwide scale, GPV severely affects geese production. The objective of this study is to develop a loop-mediated isothermal amplification (LAMP) method for the sensitive, ra...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2010
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2829533/ https://www.ncbi.nlm.nih.gov/pubmed/20092637 http://dx.doi.org/10.1186/1743-422X-7-14 |
_version_ | 1782178105619644416 |
---|---|
author | JinLong, Yang Rui, Yang AnChun, Cheng MingShu, Wang LiZhi, Fu SongQuan, Yang SuHui, Zhang Liu, Yang ZhiYong, Xu |
author_facet | JinLong, Yang Rui, Yang AnChun, Cheng MingShu, Wang LiZhi, Fu SongQuan, Yang SuHui, Zhang Liu, Yang ZhiYong, Xu |
author_sort | JinLong, Yang |
collection | PubMed |
description | BACKGROUND: Goose parvovirus (GPV) is a Dependovirus associated with latent infection and mortality in geese. Currently, in a worldwide scale, GPV severely affects geese production. The objective of this study is to develop a loop-mediated isothermal amplification (LAMP) method for the sensitive, rapid, and inexpensive detection of GPV in the field. RESULTS: A set of six specific primers was designed by targeting the GPV VP3 DNA. With Bst DNA polymerase large fragment, the target DNA could be amplified at 65°C as early as 20 min of incubation in a simple water bath. A positive reaction was identified through the detection of the LAMP product by color change visible to the naked eye. The detection limit of the assay was 28 copies/μl of plasmid pVP3, and with equal sensitivity and specificity to fluorescent quantitative real-time PCR (FQ-PCR). CONCLUSIONS: The high sensitivity, specificity, and simplicity, as well as the high throughput, make this method suitable for specific detection of GPV infection in both field conditions and laboratory settings. The utilization of complicated equipment and conduct of technical training on the GPV LAMP were not necessary. |
format | Text |
id | pubmed-2829533 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-28295332010-02-28 A simple and rapid method for detection of Goose Parvovirus in the field by loop-mediated isothermal amplification JinLong, Yang Rui, Yang AnChun, Cheng MingShu, Wang LiZhi, Fu SongQuan, Yang SuHui, Zhang Liu, Yang ZhiYong, Xu Virol J Research BACKGROUND: Goose parvovirus (GPV) is a Dependovirus associated with latent infection and mortality in geese. Currently, in a worldwide scale, GPV severely affects geese production. The objective of this study is to develop a loop-mediated isothermal amplification (LAMP) method for the sensitive, rapid, and inexpensive detection of GPV in the field. RESULTS: A set of six specific primers was designed by targeting the GPV VP3 DNA. With Bst DNA polymerase large fragment, the target DNA could be amplified at 65°C as early as 20 min of incubation in a simple water bath. A positive reaction was identified through the detection of the LAMP product by color change visible to the naked eye. The detection limit of the assay was 28 copies/μl of plasmid pVP3, and with equal sensitivity and specificity to fluorescent quantitative real-time PCR (FQ-PCR). CONCLUSIONS: The high sensitivity, specificity, and simplicity, as well as the high throughput, make this method suitable for specific detection of GPV infection in both field conditions and laboratory settings. The utilization of complicated equipment and conduct of technical training on the GPV LAMP were not necessary. BioMed Central 2010-01-21 /pmc/articles/PMC2829533/ /pubmed/20092637 http://dx.doi.org/10.1186/1743-422X-7-14 Text en Copyright ©2010 JinLong et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research JinLong, Yang Rui, Yang AnChun, Cheng MingShu, Wang LiZhi, Fu SongQuan, Yang SuHui, Zhang Liu, Yang ZhiYong, Xu A simple and rapid method for detection of Goose Parvovirus in the field by loop-mediated isothermal amplification |
title | A simple and rapid method for detection of Goose Parvovirus in the field by loop-mediated isothermal amplification |
title_full | A simple and rapid method for detection of Goose Parvovirus in the field by loop-mediated isothermal amplification |
title_fullStr | A simple and rapid method for detection of Goose Parvovirus in the field by loop-mediated isothermal amplification |
title_full_unstemmed | A simple and rapid method for detection of Goose Parvovirus in the field by loop-mediated isothermal amplification |
title_short | A simple and rapid method for detection of Goose Parvovirus in the field by loop-mediated isothermal amplification |
title_sort | simple and rapid method for detection of goose parvovirus in the field by loop-mediated isothermal amplification |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2829533/ https://www.ncbi.nlm.nih.gov/pubmed/20092637 http://dx.doi.org/10.1186/1743-422X-7-14 |
work_keys_str_mv | AT jinlongyang asimpleandrapidmethodfordetectionofgooseparvovirusinthefieldbyloopmediatedisothermalamplification AT ruiyang asimpleandrapidmethodfordetectionofgooseparvovirusinthefieldbyloopmediatedisothermalamplification AT anchuncheng asimpleandrapidmethodfordetectionofgooseparvovirusinthefieldbyloopmediatedisothermalamplification AT mingshuwang asimpleandrapidmethodfordetectionofgooseparvovirusinthefieldbyloopmediatedisothermalamplification AT lizhifu asimpleandrapidmethodfordetectionofgooseparvovirusinthefieldbyloopmediatedisothermalamplification AT songquanyang asimpleandrapidmethodfordetectionofgooseparvovirusinthefieldbyloopmediatedisothermalamplification AT suhuizhang asimpleandrapidmethodfordetectionofgooseparvovirusinthefieldbyloopmediatedisothermalamplification AT liuyang asimpleandrapidmethodfordetectionofgooseparvovirusinthefieldbyloopmediatedisothermalamplification AT zhiyongxu asimpleandrapidmethodfordetectionofgooseparvovirusinthefieldbyloopmediatedisothermalamplification AT jinlongyang simpleandrapidmethodfordetectionofgooseparvovirusinthefieldbyloopmediatedisothermalamplification AT ruiyang simpleandrapidmethodfordetectionofgooseparvovirusinthefieldbyloopmediatedisothermalamplification AT anchuncheng simpleandrapidmethodfordetectionofgooseparvovirusinthefieldbyloopmediatedisothermalamplification AT mingshuwang simpleandrapidmethodfordetectionofgooseparvovirusinthefieldbyloopmediatedisothermalamplification AT lizhifu simpleandrapidmethodfordetectionofgooseparvovirusinthefieldbyloopmediatedisothermalamplification AT songquanyang simpleandrapidmethodfordetectionofgooseparvovirusinthefieldbyloopmediatedisothermalamplification AT suhuizhang simpleandrapidmethodfordetectionofgooseparvovirusinthefieldbyloopmediatedisothermalamplification AT liuyang simpleandrapidmethodfordetectionofgooseparvovirusinthefieldbyloopmediatedisothermalamplification AT zhiyongxu simpleandrapidmethodfordetectionofgooseparvovirusinthefieldbyloopmediatedisothermalamplification |