Cargando…

A Quantitative Study of the Hog1 MAPK Response to Fluctuating Osmotic Stress in Saccharomyces cerevisiae

BACKGROUND: Yeast cells live in a highly fluctuating environment with respect to temperature, nutrients, and especially osmolarity. The Hog1 mitogen-activated protein kinase (MAPK) pathway is crucial for the adaption of yeast cells to external osmotic changes. METHODOLOGY/PRINCIPAL FINDINGS: To bett...

Descripción completa

Detalles Bibliográficos
Autores principales: Zi, Zhike, Liebermeister, Wolfram, Klipp, Edda
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2831999/
https://www.ncbi.nlm.nih.gov/pubmed/20209100
http://dx.doi.org/10.1371/journal.pone.0009522
_version_ 1782178309042339840
author Zi, Zhike
Liebermeister, Wolfram
Klipp, Edda
author_facet Zi, Zhike
Liebermeister, Wolfram
Klipp, Edda
author_sort Zi, Zhike
collection PubMed
description BACKGROUND: Yeast cells live in a highly fluctuating environment with respect to temperature, nutrients, and especially osmolarity. The Hog1 mitogen-activated protein kinase (MAPK) pathway is crucial for the adaption of yeast cells to external osmotic changes. METHODOLOGY/PRINCIPAL FINDINGS: To better understand the osmo-adaption mechanism in the budding yeast Saccharomyces cerevisiae, we have developed a mathematical model and quantitatively investigated the Hog1 response to osmotic stress. The model agrees well with various experimental data for the Hog1 response to different types of osmotic changes. Kinetic analyses of the model indicate that budding yeast cells have evolved to protect themselves economically: while they show almost no response to fast pulse-like changes of osmolarity, they respond periodically and are well-adapted to osmotic changes with a certain frequency. To quantify the signal transduction efficiency of the osmo-adaption network, we introduced a measure of the signal response gain, which is defined as the ratio of output change integral to input (signal) change integral. Model simulations indicate that the Hog1 response gain shows bell-shaped response curves with respect to the duration of a single osmotic pulse and to the frequency of periodic square osmotic pulses, while for up-staircase (ramp) osmotic changes, the gain depends on the slope. CONCLUSIONS/SIGNIFICANCE: The model analyses suggest that budding yeast cells have selectively evolved to be optimized to some specific types of osmotic changes. In addition, our work implies that the signaling output can be dynamically controlled by fine-tuning the signal input profiles.
format Text
id pubmed-2831999
institution National Center for Biotechnology Information
language English
publishDate 2010
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-28319992010-03-06 A Quantitative Study of the Hog1 MAPK Response to Fluctuating Osmotic Stress in Saccharomyces cerevisiae Zi, Zhike Liebermeister, Wolfram Klipp, Edda PLoS One Research Article BACKGROUND: Yeast cells live in a highly fluctuating environment with respect to temperature, nutrients, and especially osmolarity. The Hog1 mitogen-activated protein kinase (MAPK) pathway is crucial for the adaption of yeast cells to external osmotic changes. METHODOLOGY/PRINCIPAL FINDINGS: To better understand the osmo-adaption mechanism in the budding yeast Saccharomyces cerevisiae, we have developed a mathematical model and quantitatively investigated the Hog1 response to osmotic stress. The model agrees well with various experimental data for the Hog1 response to different types of osmotic changes. Kinetic analyses of the model indicate that budding yeast cells have evolved to protect themselves economically: while they show almost no response to fast pulse-like changes of osmolarity, they respond periodically and are well-adapted to osmotic changes with a certain frequency. To quantify the signal transduction efficiency of the osmo-adaption network, we introduced a measure of the signal response gain, which is defined as the ratio of output change integral to input (signal) change integral. Model simulations indicate that the Hog1 response gain shows bell-shaped response curves with respect to the duration of a single osmotic pulse and to the frequency of periodic square osmotic pulses, while for up-staircase (ramp) osmotic changes, the gain depends on the slope. CONCLUSIONS/SIGNIFICANCE: The model analyses suggest that budding yeast cells have selectively evolved to be optimized to some specific types of osmotic changes. In addition, our work implies that the signaling output can be dynamically controlled by fine-tuning the signal input profiles. Public Library of Science 2010-03-04 /pmc/articles/PMC2831999/ /pubmed/20209100 http://dx.doi.org/10.1371/journal.pone.0009522 Text en Zi et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Zi, Zhike
Liebermeister, Wolfram
Klipp, Edda
A Quantitative Study of the Hog1 MAPK Response to Fluctuating Osmotic Stress in Saccharomyces cerevisiae
title A Quantitative Study of the Hog1 MAPK Response to Fluctuating Osmotic Stress in Saccharomyces cerevisiae
title_full A Quantitative Study of the Hog1 MAPK Response to Fluctuating Osmotic Stress in Saccharomyces cerevisiae
title_fullStr A Quantitative Study of the Hog1 MAPK Response to Fluctuating Osmotic Stress in Saccharomyces cerevisiae
title_full_unstemmed A Quantitative Study of the Hog1 MAPK Response to Fluctuating Osmotic Stress in Saccharomyces cerevisiae
title_short A Quantitative Study of the Hog1 MAPK Response to Fluctuating Osmotic Stress in Saccharomyces cerevisiae
title_sort quantitative study of the hog1 mapk response to fluctuating osmotic stress in saccharomyces cerevisiae
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2831999/
https://www.ncbi.nlm.nih.gov/pubmed/20209100
http://dx.doi.org/10.1371/journal.pone.0009522
work_keys_str_mv AT zizhike aquantitativestudyofthehog1mapkresponsetofluctuatingosmoticstressinsaccharomycescerevisiae
AT liebermeisterwolfram aquantitativestudyofthehog1mapkresponsetofluctuatingosmoticstressinsaccharomycescerevisiae
AT klippedda aquantitativestudyofthehog1mapkresponsetofluctuatingosmoticstressinsaccharomycescerevisiae
AT zizhike quantitativestudyofthehog1mapkresponsetofluctuatingosmoticstressinsaccharomycescerevisiae
AT liebermeisterwolfram quantitativestudyofthehog1mapkresponsetofluctuatingosmoticstressinsaccharomycescerevisiae
AT klippedda quantitativestudyofthehog1mapkresponsetofluctuatingosmoticstressinsaccharomycescerevisiae