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Dynamic metabolomic data analysis: a tutorial review
In metabolomics, time-resolved, dynamic or temporal data is more and more collected. The number of methods to analyze such data, however, is very limited and in most cases the dynamic nature of the data is not even taken into account. This paper reviews current methods in use for analyzing dynamic m...
Autores principales: | , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Springer US
2009
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2834778/ https://www.ncbi.nlm.nih.gov/pubmed/20339444 http://dx.doi.org/10.1007/s11306-009-0191-1 |
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author | Smilde, A. K. Westerhuis, J. A. Hoefsloot, H. C. J. Bijlsma, S. Rubingh, C. M. Vis, D. J. Jellema, R. H. Pijl, H. Roelfsema, F. van der Greef, J. |
author_facet | Smilde, A. K. Westerhuis, J. A. Hoefsloot, H. C. J. Bijlsma, S. Rubingh, C. M. Vis, D. J. Jellema, R. H. Pijl, H. Roelfsema, F. van der Greef, J. |
author_sort | Smilde, A. K. |
collection | PubMed |
description | In metabolomics, time-resolved, dynamic or temporal data is more and more collected. The number of methods to analyze such data, however, is very limited and in most cases the dynamic nature of the data is not even taken into account. This paper reviews current methods in use for analyzing dynamic metabolomic data. Moreover, some methods from other fields of science that may be of use to analyze such dynamic metabolomics data are described in some detail. The methods are put in a general framework after providing a formal definition on what constitutes a ‘dynamic’ method. Some of the methods are illustrated with real-life metabolomics examples. |
format | Text |
id | pubmed-2834778 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-28347782010-03-24 Dynamic metabolomic data analysis: a tutorial review Smilde, A. K. Westerhuis, J. A. Hoefsloot, H. C. J. Bijlsma, S. Rubingh, C. M. Vis, D. J. Jellema, R. H. Pijl, H. Roelfsema, F. van der Greef, J. Metabolomics Review Article In metabolomics, time-resolved, dynamic or temporal data is more and more collected. The number of methods to analyze such data, however, is very limited and in most cases the dynamic nature of the data is not even taken into account. This paper reviews current methods in use for analyzing dynamic metabolomic data. Moreover, some methods from other fields of science that may be of use to analyze such dynamic metabolomics data are described in some detail. The methods are put in a general framework after providing a formal definition on what constitutes a ‘dynamic’ method. Some of the methods are illustrated with real-life metabolomics examples. Springer US 2009-12-04 2010 /pmc/articles/PMC2834778/ /pubmed/20339444 http://dx.doi.org/10.1007/s11306-009-0191-1 Text en © The Author(s) 2009 https://creativecommons.org/licenses/by-nc/4.0/ This article is distributed under the terms of the Creative Commons Attribution Noncommercial License which permits any noncommercial use, distribution, and reproduction in any medium, provided the original author(s) and source are credited. |
spellingShingle | Review Article Smilde, A. K. Westerhuis, J. A. Hoefsloot, H. C. J. Bijlsma, S. Rubingh, C. M. Vis, D. J. Jellema, R. H. Pijl, H. Roelfsema, F. van der Greef, J. Dynamic metabolomic data analysis: a tutorial review |
title | Dynamic metabolomic data analysis: a tutorial review |
title_full | Dynamic metabolomic data analysis: a tutorial review |
title_fullStr | Dynamic metabolomic data analysis: a tutorial review |
title_full_unstemmed | Dynamic metabolomic data analysis: a tutorial review |
title_short | Dynamic metabolomic data analysis: a tutorial review |
title_sort | dynamic metabolomic data analysis: a tutorial review |
topic | Review Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2834778/ https://www.ncbi.nlm.nih.gov/pubmed/20339444 http://dx.doi.org/10.1007/s11306-009-0191-1 |
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