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Source Partitioning Using Stable Isotopes: Coping with Too Much Variation
BACKGROUND: Stable isotope analysis is increasingly being utilised across broad areas of ecology and biology. Key to much of this work is the use of mixing models to estimate the proportion of sources contributing to a mixture such as in diet estimation. METHODOLOGY: By accurately reflecting natural...
Autores principales: | , , , |
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Formato: | Texto |
Lenguaje: | English |
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Public Library of Science
2010
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2837382/ https://www.ncbi.nlm.nih.gov/pubmed/20300637 http://dx.doi.org/10.1371/journal.pone.0009672 |
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author | Parnell, Andrew C. Inger, Richard Bearhop, Stuart Jackson, Andrew L. |
author_facet | Parnell, Andrew C. Inger, Richard Bearhop, Stuart Jackson, Andrew L. |
author_sort | Parnell, Andrew C. |
collection | PubMed |
description | BACKGROUND: Stable isotope analysis is increasingly being utilised across broad areas of ecology and biology. Key to much of this work is the use of mixing models to estimate the proportion of sources contributing to a mixture such as in diet estimation. METHODOLOGY: By accurately reflecting natural variation and uncertainty to generate robust probability estimates of source proportions, the application of Bayesian methods to stable isotope mixing models promises to enable researchers to address an array of new questions, and approach current questions with greater insight and honesty. CONCLUSIONS: We outline a framework that builds on recently published Bayesian isotopic mixing models and present a new open source R package, SIAR. The formulation in R will allow for continued and rapid development of this core model into an all-encompassing single analysis suite for stable isotope research. |
format | Text |
id | pubmed-2837382 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-28373822010-03-17 Source Partitioning Using Stable Isotopes: Coping with Too Much Variation Parnell, Andrew C. Inger, Richard Bearhop, Stuart Jackson, Andrew L. PLoS One Research Article BACKGROUND: Stable isotope analysis is increasingly being utilised across broad areas of ecology and biology. Key to much of this work is the use of mixing models to estimate the proportion of sources contributing to a mixture such as in diet estimation. METHODOLOGY: By accurately reflecting natural variation and uncertainty to generate robust probability estimates of source proportions, the application of Bayesian methods to stable isotope mixing models promises to enable researchers to address an array of new questions, and approach current questions with greater insight and honesty. CONCLUSIONS: We outline a framework that builds on recently published Bayesian isotopic mixing models and present a new open source R package, SIAR. The formulation in R will allow for continued and rapid development of this core model into an all-encompassing single analysis suite for stable isotope research. Public Library of Science 2010-03-12 /pmc/articles/PMC2837382/ /pubmed/20300637 http://dx.doi.org/10.1371/journal.pone.0009672 Text en Parnell et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Parnell, Andrew C. Inger, Richard Bearhop, Stuart Jackson, Andrew L. Source Partitioning Using Stable Isotopes: Coping with Too Much Variation |
title | Source Partitioning Using Stable Isotopes: Coping with Too Much Variation |
title_full | Source Partitioning Using Stable Isotopes: Coping with Too Much Variation |
title_fullStr | Source Partitioning Using Stable Isotopes: Coping with Too Much Variation |
title_full_unstemmed | Source Partitioning Using Stable Isotopes: Coping with Too Much Variation |
title_short | Source Partitioning Using Stable Isotopes: Coping with Too Much Variation |
title_sort | source partitioning using stable isotopes: coping with too much variation |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2837382/ https://www.ncbi.nlm.nih.gov/pubmed/20300637 http://dx.doi.org/10.1371/journal.pone.0009672 |
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