Cargando…

Source Partitioning Using Stable Isotopes: Coping with Too Much Variation

BACKGROUND: Stable isotope analysis is increasingly being utilised across broad areas of ecology and biology. Key to much of this work is the use of mixing models to estimate the proportion of sources contributing to a mixture such as in diet estimation. METHODOLOGY: By accurately reflecting natural...

Descripción completa

Detalles Bibliográficos
Autores principales: Parnell, Andrew C., Inger, Richard, Bearhop, Stuart, Jackson, Andrew L.
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2837382/
https://www.ncbi.nlm.nih.gov/pubmed/20300637
http://dx.doi.org/10.1371/journal.pone.0009672
_version_ 1782178811603845120
author Parnell, Andrew C.
Inger, Richard
Bearhop, Stuart
Jackson, Andrew L.
author_facet Parnell, Andrew C.
Inger, Richard
Bearhop, Stuart
Jackson, Andrew L.
author_sort Parnell, Andrew C.
collection PubMed
description BACKGROUND: Stable isotope analysis is increasingly being utilised across broad areas of ecology and biology. Key to much of this work is the use of mixing models to estimate the proportion of sources contributing to a mixture such as in diet estimation. METHODOLOGY: By accurately reflecting natural variation and uncertainty to generate robust probability estimates of source proportions, the application of Bayesian methods to stable isotope mixing models promises to enable researchers to address an array of new questions, and approach current questions with greater insight and honesty. CONCLUSIONS: We outline a framework that builds on recently published Bayesian isotopic mixing models and present a new open source R package, SIAR. The formulation in R will allow for continued and rapid development of this core model into an all-encompassing single analysis suite for stable isotope research.
format Text
id pubmed-2837382
institution National Center for Biotechnology Information
language English
publishDate 2010
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-28373822010-03-17 Source Partitioning Using Stable Isotopes: Coping with Too Much Variation Parnell, Andrew C. Inger, Richard Bearhop, Stuart Jackson, Andrew L. PLoS One Research Article BACKGROUND: Stable isotope analysis is increasingly being utilised across broad areas of ecology and biology. Key to much of this work is the use of mixing models to estimate the proportion of sources contributing to a mixture such as in diet estimation. METHODOLOGY: By accurately reflecting natural variation and uncertainty to generate robust probability estimates of source proportions, the application of Bayesian methods to stable isotope mixing models promises to enable researchers to address an array of new questions, and approach current questions with greater insight and honesty. CONCLUSIONS: We outline a framework that builds on recently published Bayesian isotopic mixing models and present a new open source R package, SIAR. The formulation in R will allow for continued and rapid development of this core model into an all-encompassing single analysis suite for stable isotope research. Public Library of Science 2010-03-12 /pmc/articles/PMC2837382/ /pubmed/20300637 http://dx.doi.org/10.1371/journal.pone.0009672 Text en Parnell et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Parnell, Andrew C.
Inger, Richard
Bearhop, Stuart
Jackson, Andrew L.
Source Partitioning Using Stable Isotopes: Coping with Too Much Variation
title Source Partitioning Using Stable Isotopes: Coping with Too Much Variation
title_full Source Partitioning Using Stable Isotopes: Coping with Too Much Variation
title_fullStr Source Partitioning Using Stable Isotopes: Coping with Too Much Variation
title_full_unstemmed Source Partitioning Using Stable Isotopes: Coping with Too Much Variation
title_short Source Partitioning Using Stable Isotopes: Coping with Too Much Variation
title_sort source partitioning using stable isotopes: coping with too much variation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2837382/
https://www.ncbi.nlm.nih.gov/pubmed/20300637
http://dx.doi.org/10.1371/journal.pone.0009672
work_keys_str_mv AT parnellandrewc sourcepartitioningusingstableisotopescopingwithtoomuchvariation
AT ingerrichard sourcepartitioningusingstableisotopescopingwithtoomuchvariation
AT bearhopstuart sourcepartitioningusingstableisotopescopingwithtoomuchvariation
AT jacksonandrewl sourcepartitioningusingstableisotopescopingwithtoomuchvariation