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Sequences and consequences

The conversion of data into knowledge constitutes a great challenge for future biological research. The new science of Systems Biology claims to be able to solve the problem but I contend that this approach will fail because deducing models of function from the behaviour of a complex system is an in...

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Detalles Bibliográficos
Autor principal: Brenner, Sydney
Formato: Texto
Lenguaje:English
Publicado: The Royal Society 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2842711/
https://www.ncbi.nlm.nih.gov/pubmed/20008397
http://dx.doi.org/10.1098/rstb.2009.0221
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author Brenner, Sydney
author_facet Brenner, Sydney
author_sort Brenner, Sydney
collection PubMed
description The conversion of data into knowledge constitutes a great challenge for future biological research. The new science of Systems Biology claims to be able to solve the problem but I contend that this approach will fail because deducing models of function from the behaviour of a complex system is an inverse problem that is impossible to solve. In addition, one cannot easily escape into high-level holistic approaches, since the essence of all biological systems is that they are encoded as molecular descriptions in their genes and since genes are molecules and exert their functions through other molecules, the molecular explanation must constitute the core of understanding biological systems. We then solve the forward problem of computing the behaviour of the system from its components and their interactions. I propose that the correct level of abstraction is the cell and provide an outline of Cellmap, a design for a system to organize biological information.
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spelling pubmed-28427112010-03-23 Sequences and consequences Brenner, Sydney Philos Trans R Soc Lond B Biol Sci Articles The conversion of data into knowledge constitutes a great challenge for future biological research. The new science of Systems Biology claims to be able to solve the problem but I contend that this approach will fail because deducing models of function from the behaviour of a complex system is an inverse problem that is impossible to solve. In addition, one cannot easily escape into high-level holistic approaches, since the essence of all biological systems is that they are encoded as molecular descriptions in their genes and since genes are molecules and exert their functions through other molecules, the molecular explanation must constitute the core of understanding biological systems. We then solve the forward problem of computing the behaviour of the system from its components and their interactions. I propose that the correct level of abstraction is the cell and provide an outline of Cellmap, a design for a system to organize biological information. The Royal Society 2010-01-12 /pmc/articles/PMC2842711/ /pubmed/20008397 http://dx.doi.org/10.1098/rstb.2009.0221 Text en © 2010 The Royal Society http://creativecommons.org/licenses/by/2.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Brenner, Sydney
Sequences and consequences
title Sequences and consequences
title_full Sequences and consequences
title_fullStr Sequences and consequences
title_full_unstemmed Sequences and consequences
title_short Sequences and consequences
title_sort sequences and consequences
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2842711/
https://www.ncbi.nlm.nih.gov/pubmed/20008397
http://dx.doi.org/10.1098/rstb.2009.0221
work_keys_str_mv AT brennersydney sequencesandconsequences