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Polyphasic re-examination of Debaryomyces hansenii strains and reinstatement of D. hansenii, D. fabryi and D. subglobosus
The type species of the genus Debaryomyces, Debaryomyces hansenii, is a highly heterogeneous species. It has been isolated from a large diversity of natural sources including fruit, air, water, soil, but most frequently from processed food products. The species delineation of this yeast species urge...
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Formato: | Texto |
Lenguaje: | English |
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Nationaal Herbarium Nederland & Centraallbureau voor Schimmelcultures
2008
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2846122/ https://www.ncbi.nlm.nih.gov/pubmed/20396575 http://dx.doi.org/10.3767/003158508X336576 |
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author | Groenewald, M. Daniel, H.-M. Robert, V. Poot, G.A. Smith, M.Th. |
author_facet | Groenewald, M. Daniel, H.-M. Robert, V. Poot, G.A. Smith, M.Th. |
author_sort | Groenewald, M. |
collection | PubMed |
description | The type species of the genus Debaryomyces, Debaryomyces hansenii, is a highly heterogeneous species. It has been isolated from a large diversity of natural sources including fruit, air, water, soil, but most frequently from processed food products. The species delineation of this yeast species urgently needs clarification. The heterogeneity in taxonomic characteristics has resulted in the description of varieties linked to D. hansenii. The aim of this study was to re-examine and classify D. hansenii using a polyphasic approach. A total of 65 D. hansenii isolates were examined, 57 representing the variety hansenii and nine the variety fabryi. The selection of strains for DNA reassociation and phylogenetic analysis was based on polymerase chain reaction mediated fingerprints using four mini- and microsatellite-specific primers. The discriminating power of growth at 35 °C and 37 °C was re-examined and ascospore production was observed. DNA reassociations and phylogenetic analyses were performed on selected isolates from each of the clusters obtained from the DNA fingerprint analyses. The data indicated the presence of three distinct species within the D. hansenii group, which were represented by type strains of former species and that are proposed to be reinstated: D. hansenii (CBS 767(T) = MUCL 49680(T)), D. fabryi (CBS 789(T) = MUCL 49731(T)) and D. subglobosus (CBS 792(T) = MUCL 49732(T)). |
format | Text |
id | pubmed-2846122 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2008 |
publisher | Nationaal Herbarium Nederland & Centraallbureau voor Schimmelcultures |
record_format | MEDLINE/PubMed |
spelling | pubmed-28461222010-04-14 Polyphasic re-examination of Debaryomyces hansenii strains and reinstatement of D. hansenii, D. fabryi and D. subglobosus Groenewald, M. Daniel, H.-M. Robert, V. Poot, G.A. Smith, M.Th. Persoonia Research Article The type species of the genus Debaryomyces, Debaryomyces hansenii, is a highly heterogeneous species. It has been isolated from a large diversity of natural sources including fruit, air, water, soil, but most frequently from processed food products. The species delineation of this yeast species urgently needs clarification. The heterogeneity in taxonomic characteristics has resulted in the description of varieties linked to D. hansenii. The aim of this study was to re-examine and classify D. hansenii using a polyphasic approach. A total of 65 D. hansenii isolates were examined, 57 representing the variety hansenii and nine the variety fabryi. The selection of strains for DNA reassociation and phylogenetic analysis was based on polymerase chain reaction mediated fingerprints using four mini- and microsatellite-specific primers. The discriminating power of growth at 35 °C and 37 °C was re-examined and ascospore production was observed. DNA reassociations and phylogenetic analyses were performed on selected isolates from each of the clusters obtained from the DNA fingerprint analyses. The data indicated the presence of three distinct species within the D. hansenii group, which were represented by type strains of former species and that are proposed to be reinstated: D. hansenii (CBS 767(T) = MUCL 49680(T)), D. fabryi (CBS 789(T) = MUCL 49731(T)) and D. subglobosus (CBS 792(T) = MUCL 49732(T)). Nationaal Herbarium Nederland & Centraallbureau voor Schimmelcultures 2008-07-02 2008-12 /pmc/articles/PMC2846122/ /pubmed/20396575 http://dx.doi.org/10.3767/003158508X336576 Text en © 2008 Nationaal Herbarium Nederland & Centraalbureau voor Schimmelcultures http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode You are free to share - to copy, distribute and transmit the work, under the following conditions: Attribution: You must attribute the work in the manner specified by the author or licensor (but not in any way that suggests that they endorse you or your use of the work). Non-commercial: You may not use this work for commercial purposes. No derivative works: You may not alter, transform, or build upon this work. For any reuse or distribution, you must make clear to others the license terms of this work, which can be found at http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode. (http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode) Any of the above conditions can be waived if you get permission from the copyright holder. Nothing in this license impairs or restricts the author’s moral rights. |
spellingShingle | Research Article Groenewald, M. Daniel, H.-M. Robert, V. Poot, G.A. Smith, M.Th. Polyphasic re-examination of Debaryomyces hansenii strains and reinstatement of D. hansenii, D. fabryi and D. subglobosus |
title | Polyphasic re-examination of Debaryomyces hansenii strains and reinstatement of D. hansenii, D. fabryi and D. subglobosus
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title_full | Polyphasic re-examination of Debaryomyces hansenii strains and reinstatement of D. hansenii, D. fabryi and D. subglobosus
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title_fullStr | Polyphasic re-examination of Debaryomyces hansenii strains and reinstatement of D. hansenii, D. fabryi and D. subglobosus
|
title_full_unstemmed | Polyphasic re-examination of Debaryomyces hansenii strains and reinstatement of D. hansenii, D. fabryi and D. subglobosus
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title_short | Polyphasic re-examination of Debaryomyces hansenii strains and reinstatement of D. hansenii, D. fabryi and D. subglobosus
|
title_sort | polyphasic re-examination of debaryomyces hansenii strains and reinstatement of d. hansenii, d. fabryi and d. subglobosus |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2846122/ https://www.ncbi.nlm.nih.gov/pubmed/20396575 http://dx.doi.org/10.3767/003158508X336576 |
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