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XPD Polymorphisms and Risk of Squamous Cell Carcinoma of the Head and Neck in a Korean Sample

OBJECTIVES: XPD is a major player in nucleotide excision repair, which is one of the basic pathways of DNA repair. The objective of this study was to investigate the association of XPD single nucleotide polymorphisms (SNPs) and the risk of squamous cell carcinoma of the head and neck (SCCHN) in Kore...

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Autores principales: Ji, Yong Bae, Tae, Kyung, Lee, Yoon Seo, Lee, Seung Hwan, Kim, Kyung Rae, Park, Chul Won, Park, Byung Lae, Shin, Hyoung Doo
Formato: Texto
Lenguaje:English
Publicado: Korean Society of Otorhinolaryngology-Head and Neck Surgery 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2848318/
https://www.ncbi.nlm.nih.gov/pubmed/20379402
http://dx.doi.org/10.3342/ceo.2010.3.1.42
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author Ji, Yong Bae
Tae, Kyung
Lee, Yoon Seo
Lee, Seung Hwan
Kim, Kyung Rae
Park, Chul Won
Park, Byung Lae
Shin, Hyoung Doo
author_facet Ji, Yong Bae
Tae, Kyung
Lee, Yoon Seo
Lee, Seung Hwan
Kim, Kyung Rae
Park, Chul Won
Park, Byung Lae
Shin, Hyoung Doo
author_sort Ji, Yong Bae
collection PubMed
description OBJECTIVES: XPD is a major player in nucleotide excision repair, which is one of the basic pathways of DNA repair. The objective of this study was to investigate the association of XPD single nucleotide polymorphisms (SNPs) and the risk of squamous cell carcinoma of the head and neck (SCCHN) in Koreans. METHODS: We performed XPD +23591G>A and +35931A>C genotyping in 290 SCCHN patients and 358 controls. RESULTS: The frequencies of the XPD +23591G>A (GG/GA/AA) genotypes were 89.0%/11.0%/0% in the patients and 90.3%/8.8%/0.9% in the controls, respectively. The odds ratio (OR) of the XPD +23591 GA genotype was 1.94 (0.92 to 4.08) in reference to the GG genotype. The frequencies of the XPD +35931A>C (AA/AC/CC) genotypes were 86.9%/12.0%/1.1% in the patients and 85.6%/13.8%/0.6% in the controls, respectively. The OR of the XPD +35931 AC and CC genotypes were 0.98 (0.51 to 1.88) and 2.68 (0.71 to 10.1), respectively, in reference to the AA genotype. On the subgroup analyses according to the smoking and drinking statuses, the SNPs and haplotypes of XPD showed no statistically significant association with the risk of SCCHN. CONCLUSION: The results of this study suggest that the XPD +23591G>A and +35931A>C SNPs are not associated with the risk of SCCHN in Koreans; however, a further study with a larger number of subjects is necessary to verify this conclusion.
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spelling pubmed-28483182010-04-08 XPD Polymorphisms and Risk of Squamous Cell Carcinoma of the Head and Neck in a Korean Sample Ji, Yong Bae Tae, Kyung Lee, Yoon Seo Lee, Seung Hwan Kim, Kyung Rae Park, Chul Won Park, Byung Lae Shin, Hyoung Doo Clin Exp Otorhinolaryngol Original Article OBJECTIVES: XPD is a major player in nucleotide excision repair, which is one of the basic pathways of DNA repair. The objective of this study was to investigate the association of XPD single nucleotide polymorphisms (SNPs) and the risk of squamous cell carcinoma of the head and neck (SCCHN) in Koreans. METHODS: We performed XPD +23591G>A and +35931A>C genotyping in 290 SCCHN patients and 358 controls. RESULTS: The frequencies of the XPD +23591G>A (GG/GA/AA) genotypes were 89.0%/11.0%/0% in the patients and 90.3%/8.8%/0.9% in the controls, respectively. The odds ratio (OR) of the XPD +23591 GA genotype was 1.94 (0.92 to 4.08) in reference to the GG genotype. The frequencies of the XPD +35931A>C (AA/AC/CC) genotypes were 86.9%/12.0%/1.1% in the patients and 85.6%/13.8%/0.6% in the controls, respectively. The OR of the XPD +35931 AC and CC genotypes were 0.98 (0.51 to 1.88) and 2.68 (0.71 to 10.1), respectively, in reference to the AA genotype. On the subgroup analyses according to the smoking and drinking statuses, the SNPs and haplotypes of XPD showed no statistically significant association with the risk of SCCHN. CONCLUSION: The results of this study suggest that the XPD +23591G>A and +35931A>C SNPs are not associated with the risk of SCCHN in Koreans; however, a further study with a larger number of subjects is necessary to verify this conclusion. Korean Society of Otorhinolaryngology-Head and Neck Surgery 2010-03 2010-03-30 /pmc/articles/PMC2848318/ /pubmed/20379402 http://dx.doi.org/10.3342/ceo.2010.3.1.42 Text en Copyright © 2010 Korean Society of Otorhinolaryngology-Head and Neck Surgery http://creativecommons.org/licenses/by-nc/3.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Ji, Yong Bae
Tae, Kyung
Lee, Yoon Seo
Lee, Seung Hwan
Kim, Kyung Rae
Park, Chul Won
Park, Byung Lae
Shin, Hyoung Doo
XPD Polymorphisms and Risk of Squamous Cell Carcinoma of the Head and Neck in a Korean Sample
title XPD Polymorphisms and Risk of Squamous Cell Carcinoma of the Head and Neck in a Korean Sample
title_full XPD Polymorphisms and Risk of Squamous Cell Carcinoma of the Head and Neck in a Korean Sample
title_fullStr XPD Polymorphisms and Risk of Squamous Cell Carcinoma of the Head and Neck in a Korean Sample
title_full_unstemmed XPD Polymorphisms and Risk of Squamous Cell Carcinoma of the Head and Neck in a Korean Sample
title_short XPD Polymorphisms and Risk of Squamous Cell Carcinoma of the Head and Neck in a Korean Sample
title_sort xpd polymorphisms and risk of squamous cell carcinoma of the head and neck in a korean sample
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2848318/
https://www.ncbi.nlm.nih.gov/pubmed/20379402
http://dx.doi.org/10.3342/ceo.2010.3.1.42
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