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XPD Polymorphisms and Risk of Squamous Cell Carcinoma of the Head and Neck in a Korean Sample
OBJECTIVES: XPD is a major player in nucleotide excision repair, which is one of the basic pathways of DNA repair. The objective of this study was to investigate the association of XPD single nucleotide polymorphisms (SNPs) and the risk of squamous cell carcinoma of the head and neck (SCCHN) in Kore...
Autores principales: | , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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Korean Society of Otorhinolaryngology-Head and Neck Surgery
2010
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2848318/ https://www.ncbi.nlm.nih.gov/pubmed/20379402 http://dx.doi.org/10.3342/ceo.2010.3.1.42 |
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author | Ji, Yong Bae Tae, Kyung Lee, Yoon Seo Lee, Seung Hwan Kim, Kyung Rae Park, Chul Won Park, Byung Lae Shin, Hyoung Doo |
author_facet | Ji, Yong Bae Tae, Kyung Lee, Yoon Seo Lee, Seung Hwan Kim, Kyung Rae Park, Chul Won Park, Byung Lae Shin, Hyoung Doo |
author_sort | Ji, Yong Bae |
collection | PubMed |
description | OBJECTIVES: XPD is a major player in nucleotide excision repair, which is one of the basic pathways of DNA repair. The objective of this study was to investigate the association of XPD single nucleotide polymorphisms (SNPs) and the risk of squamous cell carcinoma of the head and neck (SCCHN) in Koreans. METHODS: We performed XPD +23591G>A and +35931A>C genotyping in 290 SCCHN patients and 358 controls. RESULTS: The frequencies of the XPD +23591G>A (GG/GA/AA) genotypes were 89.0%/11.0%/0% in the patients and 90.3%/8.8%/0.9% in the controls, respectively. The odds ratio (OR) of the XPD +23591 GA genotype was 1.94 (0.92 to 4.08) in reference to the GG genotype. The frequencies of the XPD +35931A>C (AA/AC/CC) genotypes were 86.9%/12.0%/1.1% in the patients and 85.6%/13.8%/0.6% in the controls, respectively. The OR of the XPD +35931 AC and CC genotypes were 0.98 (0.51 to 1.88) and 2.68 (0.71 to 10.1), respectively, in reference to the AA genotype. On the subgroup analyses according to the smoking and drinking statuses, the SNPs and haplotypes of XPD showed no statistically significant association with the risk of SCCHN. CONCLUSION: The results of this study suggest that the XPD +23591G>A and +35931A>C SNPs are not associated with the risk of SCCHN in Koreans; however, a further study with a larger number of subjects is necessary to verify this conclusion. |
format | Text |
id | pubmed-2848318 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Korean Society of Otorhinolaryngology-Head and Neck Surgery |
record_format | MEDLINE/PubMed |
spelling | pubmed-28483182010-04-08 XPD Polymorphisms and Risk of Squamous Cell Carcinoma of the Head and Neck in a Korean Sample Ji, Yong Bae Tae, Kyung Lee, Yoon Seo Lee, Seung Hwan Kim, Kyung Rae Park, Chul Won Park, Byung Lae Shin, Hyoung Doo Clin Exp Otorhinolaryngol Original Article OBJECTIVES: XPD is a major player in nucleotide excision repair, which is one of the basic pathways of DNA repair. The objective of this study was to investigate the association of XPD single nucleotide polymorphisms (SNPs) and the risk of squamous cell carcinoma of the head and neck (SCCHN) in Koreans. METHODS: We performed XPD +23591G>A and +35931A>C genotyping in 290 SCCHN patients and 358 controls. RESULTS: The frequencies of the XPD +23591G>A (GG/GA/AA) genotypes were 89.0%/11.0%/0% in the patients and 90.3%/8.8%/0.9% in the controls, respectively. The odds ratio (OR) of the XPD +23591 GA genotype was 1.94 (0.92 to 4.08) in reference to the GG genotype. The frequencies of the XPD +35931A>C (AA/AC/CC) genotypes were 86.9%/12.0%/1.1% in the patients and 85.6%/13.8%/0.6% in the controls, respectively. The OR of the XPD +35931 AC and CC genotypes were 0.98 (0.51 to 1.88) and 2.68 (0.71 to 10.1), respectively, in reference to the AA genotype. On the subgroup analyses according to the smoking and drinking statuses, the SNPs and haplotypes of XPD showed no statistically significant association with the risk of SCCHN. CONCLUSION: The results of this study suggest that the XPD +23591G>A and +35931A>C SNPs are not associated with the risk of SCCHN in Koreans; however, a further study with a larger number of subjects is necessary to verify this conclusion. Korean Society of Otorhinolaryngology-Head and Neck Surgery 2010-03 2010-03-30 /pmc/articles/PMC2848318/ /pubmed/20379402 http://dx.doi.org/10.3342/ceo.2010.3.1.42 Text en Copyright © 2010 Korean Society of Otorhinolaryngology-Head and Neck Surgery http://creativecommons.org/licenses/by-nc/3.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Ji, Yong Bae Tae, Kyung Lee, Yoon Seo Lee, Seung Hwan Kim, Kyung Rae Park, Chul Won Park, Byung Lae Shin, Hyoung Doo XPD Polymorphisms and Risk of Squamous Cell Carcinoma of the Head and Neck in a Korean Sample |
title | XPD Polymorphisms and Risk of Squamous Cell Carcinoma of the Head and Neck in a Korean Sample |
title_full | XPD Polymorphisms and Risk of Squamous Cell Carcinoma of the Head and Neck in a Korean Sample |
title_fullStr | XPD Polymorphisms and Risk of Squamous Cell Carcinoma of the Head and Neck in a Korean Sample |
title_full_unstemmed | XPD Polymorphisms and Risk of Squamous Cell Carcinoma of the Head and Neck in a Korean Sample |
title_short | XPD Polymorphisms and Risk of Squamous Cell Carcinoma of the Head and Neck in a Korean Sample |
title_sort | xpd polymorphisms and risk of squamous cell carcinoma of the head and neck in a korean sample |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2848318/ https://www.ncbi.nlm.nih.gov/pubmed/20379402 http://dx.doi.org/10.3342/ceo.2010.3.1.42 |
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