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Determination of the Phase Diagram for Soluble and Membrane Proteins
[Image: see text] Methods to efficiently determine the phase behavior of novel proteins have the potential to significantly benefit structural biology efforts. Here, we present protocols to determine both the solubility boundary and the supersolubility boundary for protein/precipitant systems using...
Autores principales: | , , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2010
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2848416/ https://www.ncbi.nlm.nih.gov/pubmed/20235520 http://dx.doi.org/10.1021/jp911780z |
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author | Talreja, Sameer Perry, Sarah L. Guha, Sudipto Bhamidi, Venkateswarlu Zukoski, Charles F. Kenis, Paul J. A. |
author_facet | Talreja, Sameer Perry, Sarah L. Guha, Sudipto Bhamidi, Venkateswarlu Zukoski, Charles F. Kenis, Paul J. A. |
author_sort | Talreja, Sameer |
collection | PubMed |
description | [Image: see text] Methods to efficiently determine the phase behavior of novel proteins have the potential to significantly benefit structural biology efforts. Here, we present protocols to determine both the solubility boundary and the supersolubility boundary for protein/precipitant systems using an evaporation-based crystallization platform. This strategy takes advantage of the well-defined rates of evaporation that occur in this platform to determine the state of the droplet at any point in time without relying on an equilibrium-based end point. The dynamic nature of this method efficiently traverses phase space along a known path, such that a solubility diagram can be mapped out for both soluble and membrane proteins while using a smaller amount of protein than what is typically used in optimization screens. Furthermore, a variation on this method can be used to decouple crystal nucleation and growth events, so fewer and larger crystals can be obtained within a given droplet. The latter protocol can be used to rescue a crystallization trial where showers of tiny crystals were observed. We validated both of the protocols to determine the phase behavior and the protocol to optimize crystal quality using the soluble proteins lysozyme and ribonuclease A as well as the membrane protein bacteriorhodopsin. |
format | Text |
id | pubmed-2848416 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-28484162010-04-01 Determination of the Phase Diagram for Soluble and Membrane Proteins Talreja, Sameer Perry, Sarah L. Guha, Sudipto Bhamidi, Venkateswarlu Zukoski, Charles F. Kenis, Paul J. A. J Phys Chem B [Image: see text] Methods to efficiently determine the phase behavior of novel proteins have the potential to significantly benefit structural biology efforts. Here, we present protocols to determine both the solubility boundary and the supersolubility boundary for protein/precipitant systems using an evaporation-based crystallization platform. This strategy takes advantage of the well-defined rates of evaporation that occur in this platform to determine the state of the droplet at any point in time without relying on an equilibrium-based end point. The dynamic nature of this method efficiently traverses phase space along a known path, such that a solubility diagram can be mapped out for both soluble and membrane proteins while using a smaller amount of protein than what is typically used in optimization screens. Furthermore, a variation on this method can be used to decouple crystal nucleation and growth events, so fewer and larger crystals can be obtained within a given droplet. The latter protocol can be used to rescue a crystallization trial where showers of tiny crystals were observed. We validated both of the protocols to determine the phase behavior and the protocol to optimize crystal quality using the soluble proteins lysozyme and ribonuclease A as well as the membrane protein bacteriorhodopsin. American Chemical Society 2010-03-17 2010-04-08 /pmc/articles/PMC2848416/ /pubmed/20235520 http://dx.doi.org/10.1021/jp911780z Text en Copyright © 2010 American Chemical Society http://pubs.acs.org This is an open-access article distributed under the ACS AuthorChoice Terms & Conditions. Any use of this article, must conform to the terms of that license which are available at http://pubs.acs.org. |
spellingShingle | Talreja, Sameer Perry, Sarah L. Guha, Sudipto Bhamidi, Venkateswarlu Zukoski, Charles F. Kenis, Paul J. A. Determination of the Phase Diagram for Soluble and Membrane Proteins |
title | Determination of the Phase Diagram for Soluble and Membrane Proteins |
title_full | Determination of the Phase Diagram for Soluble and Membrane Proteins |
title_fullStr | Determination of the Phase Diagram for Soluble and Membrane Proteins |
title_full_unstemmed | Determination of the Phase Diagram for Soluble and Membrane Proteins |
title_short | Determination of the Phase Diagram for Soluble and Membrane Proteins |
title_sort | determination of the phase diagram for soluble and membrane proteins |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2848416/ https://www.ncbi.nlm.nih.gov/pubmed/20235520 http://dx.doi.org/10.1021/jp911780z |
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