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Concepts and Synonymy in the UMLS Metathesaurus

This paper advances a detailed exploration of the complex relationships among terms, concepts, and syn­onymy in the UMLS (Unified Medical Language System) Metathesaurus, and proposes the study and under­standing of the Metathesaurus from a model-theoretic perspective. Initial sections provide the bac...

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Detalles Bibliográficos
Autor principal: Merrill, Gary H.
Formato: Texto
Lenguaje:English
Publicado: University of Illinois at Chicago Library 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2850250/
https://www.ncbi.nlm.nih.gov/pubmed/19838995
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author Merrill, Gary H.
author_facet Merrill, Gary H.
author_sort Merrill, Gary H.
collection PubMed
description This paper advances a detailed exploration of the complex relationships among terms, concepts, and syn­onymy in the UMLS (Unified Medical Language System) Metathesaurus, and proposes the study and under­standing of the Metathesaurus from a model-theoretic perspective. Initial sections provide the background and motivation for such an approach, and a careful informal treatment of these notions is offered as a con­text and basis for the formal analysis. What emerges from this is a set of puzzles and confusions in the Metathesaurus and its literature pertaining to synonymy and its relation to terms and concepts. A model theory for a segment of the Metathesaurus is then constructed, and its adequacy relative to the informal treatment is demonstrated. Finally, it is shown how this approach clarifies and addresses the puzzles educed from the informal discussion, and how the model-theoretic perspective may be employed to eval­uate some fundamental criticisms of the Metathesaurus. For users of the UMLS, two significant results of this analysis are a rigorous clarification of the different senses of synonymy that appear in treatments of the Metathesaurus and an illustration of the dangers in computing inferences involving ambiguous terms.
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spelling pubmed-28502502010-11-29 Concepts and Synonymy in the UMLS Metathesaurus Merrill, Gary H. J Biomed Discov Collab Research This paper advances a detailed exploration of the complex relationships among terms, concepts, and syn­onymy in the UMLS (Unified Medical Language System) Metathesaurus, and proposes the study and under­standing of the Metathesaurus from a model-theoretic perspective. Initial sections provide the background and motivation for such an approach, and a careful informal treatment of these notions is offered as a con­text and basis for the formal analysis. What emerges from this is a set of puzzles and confusions in the Metathesaurus and its literature pertaining to synonymy and its relation to terms and concepts. A model theory for a segment of the Metathesaurus is then constructed, and its adequacy relative to the informal treatment is demonstrated. Finally, it is shown how this approach clarifies and addresses the puzzles educed from the informal discussion, and how the model-theoretic perspective may be employed to eval­uate some fundamental criticisms of the Metathesaurus. For users of the UMLS, two significant results of this analysis are a rigorous clarification of the different senses of synonymy that appear in treatments of the Metathesaurus and an illustration of the dangers in computing inferences involving ambiguous terms. University of Illinois at Chicago Library 2009-09-14 /pmc/articles/PMC2850250/ /pubmed/19838995 Text en http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
Merrill, Gary H.
Concepts and Synonymy in the UMLS Metathesaurus
title Concepts and Synonymy in the UMLS Metathesaurus
title_full Concepts and Synonymy in the UMLS Metathesaurus
title_fullStr Concepts and Synonymy in the UMLS Metathesaurus
title_full_unstemmed Concepts and Synonymy in the UMLS Metathesaurus
title_short Concepts and Synonymy in the UMLS Metathesaurus
title_sort concepts and synonymy in the umls metathesaurus
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2850250/
https://www.ncbi.nlm.nih.gov/pubmed/19838995
work_keys_str_mv AT merrillgaryh conceptsandsynonymyintheumlsmetathesaurus