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The minimum crystal size needed for a complete diffraction data set
In this work, classic intensity formulae were united with an empirical spot-fading model in order to calculate the diameter of a spherical crystal that will scatter the required number of photons per spot at a desired resolution over the radiation-damage-limited lifetime. The influences of molecular...
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Formato: | Texto |
Lenguaje: | English |
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International Union of Crystallography
2010
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2852304/ https://www.ncbi.nlm.nih.gov/pubmed/20382993 http://dx.doi.org/10.1107/S0907444910007262 |
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author | Holton, James M. Frankel, Kenneth A. |
author_facet | Holton, James M. Frankel, Kenneth A. |
author_sort | Holton, James M. |
collection | PubMed |
description | In this work, classic intensity formulae were united with an empirical spot-fading model in order to calculate the diameter of a spherical crystal that will scatter the required number of photons per spot at a desired resolution over the radiation-damage-limited lifetime. The influences of molecular weight, solvent content, Wilson B factor, X-ray wavelength and attenuation on scattering power and dose were all included. Taking the net photon count in a spot as the only source of noise, a complete data set with a signal-to-noise ratio of 2 at 2 Å resolution was predicted to be attainable from a perfect lysozyme crystal sphere 1.2 µm in diameter and two different models of photoelectron escape reduced this to 0.5 or 0.34 µm. These represent 15-fold to 700-fold less scattering power than the smallest experimentally determined crystal size to date, but the gap was shown to be consistent with the background scattering level of the relevant experiment. These results suggest that reduction of background photons and diffraction spot size on the detector are the principal paths to improving crystallographic data quality beyond current limits. |
format | Text |
id | pubmed-2852304 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-28523042010-04-13 The minimum crystal size needed for a complete diffraction data set Holton, James M. Frankel, Kenneth A. Acta Crystallogr D Biol Crystallogr Research Papers In this work, classic intensity formulae were united with an empirical spot-fading model in order to calculate the diameter of a spherical crystal that will scatter the required number of photons per spot at a desired resolution over the radiation-damage-limited lifetime. The influences of molecular weight, solvent content, Wilson B factor, X-ray wavelength and attenuation on scattering power and dose were all included. Taking the net photon count in a spot as the only source of noise, a complete data set with a signal-to-noise ratio of 2 at 2 Å resolution was predicted to be attainable from a perfect lysozyme crystal sphere 1.2 µm in diameter and two different models of photoelectron escape reduced this to 0.5 or 0.34 µm. These represent 15-fold to 700-fold less scattering power than the smallest experimentally determined crystal size to date, but the gap was shown to be consistent with the background scattering level of the relevant experiment. These results suggest that reduction of background photons and diffraction spot size on the detector are the principal paths to improving crystallographic data quality beyond current limits. International Union of Crystallography 2010-04-01 2010-03-24 /pmc/articles/PMC2852304/ /pubmed/20382993 http://dx.doi.org/10.1107/S0907444910007262 Text en © Holton & Frankel 2010 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Papers Holton, James M. Frankel, Kenneth A. The minimum crystal size needed for a complete diffraction data set |
title | The minimum crystal size needed for a complete diffraction data set |
title_full | The minimum crystal size needed for a complete diffraction data set |
title_fullStr | The minimum crystal size needed for a complete diffraction data set |
title_full_unstemmed | The minimum crystal size needed for a complete diffraction data set |
title_short | The minimum crystal size needed for a complete diffraction data set |
title_sort | minimum crystal size needed for a complete diffraction data set |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2852304/ https://www.ncbi.nlm.nih.gov/pubmed/20382993 http://dx.doi.org/10.1107/S0907444910007262 |
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