Cargando…

The minimum crystal size needed for a complete diffraction data set

In this work, classic intensity formulae were united with an empirical spot-fading model in order to calculate the diameter of a spherical crystal that will scatter the required number of photons per spot at a desired resolution over the radiation-damage-limited lifetime. The influences of molecular...

Descripción completa

Detalles Bibliográficos
Autores principales: Holton, James M., Frankel, Kenneth A.
Formato: Texto
Lenguaje:English
Publicado: International Union of Crystallography 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2852304/
https://www.ncbi.nlm.nih.gov/pubmed/20382993
http://dx.doi.org/10.1107/S0907444910007262
_version_ 1782179929218088960
author Holton, James M.
Frankel, Kenneth A.
author_facet Holton, James M.
Frankel, Kenneth A.
author_sort Holton, James M.
collection PubMed
description In this work, classic intensity formulae were united with an empirical spot-fading model in order to calculate the diameter of a spherical crystal that will scatter the required number of photons per spot at a desired resolution over the radiation-damage-limited lifetime. The influences of molecular weight, solvent content, Wilson B factor, X-ray wavelength and attenuation on scattering power and dose were all included. Taking the net photon count in a spot as the only source of noise, a complete data set with a signal-to-noise ratio of 2 at 2 Å resolution was predicted to be attainable from a perfect lysozyme crystal sphere 1.2 µm in diameter and two different models of photoelectron escape reduced this to 0.5 or 0.34 µm. These represent 15-fold to 700-fold less scattering power than the smallest experimentally determined crystal size to date, but the gap was shown to be consistent with the background scattering level of the relevant experiment. These results suggest that reduction of background photons and diffraction spot size on the detector are the principal paths to improving crystallographic data quality beyond current limits.
format Text
id pubmed-2852304
institution National Center for Biotechnology Information
language English
publishDate 2010
publisher International Union of Crystallography
record_format MEDLINE/PubMed
spelling pubmed-28523042010-04-13 The minimum crystal size needed for a complete diffraction data set Holton, James M. Frankel, Kenneth A. Acta Crystallogr D Biol Crystallogr Research Papers In this work, classic intensity formulae were united with an empirical spot-fading model in order to calculate the diameter of a spherical crystal that will scatter the required number of photons per spot at a desired resolution over the radiation-damage-limited lifetime. The influences of molecular weight, solvent content, Wilson B factor, X-ray wavelength and attenuation on scattering power and dose were all included. Taking the net photon count in a spot as the only source of noise, a complete data set with a signal-to-noise ratio of 2 at 2 Å resolution was predicted to be attainable from a perfect lysozyme crystal sphere 1.2 µm in diameter and two different models of photoelectron escape reduced this to 0.5 or 0.34 µm. These represent 15-fold to 700-fold less scattering power than the smallest experimentally determined crystal size to date, but the gap was shown to be consistent with the background scattering level of the relevant experiment. These results suggest that reduction of background photons and diffraction spot size on the detector are the principal paths to improving crystallographic data quality beyond current limits. International Union of Crystallography 2010-04-01 2010-03-24 /pmc/articles/PMC2852304/ /pubmed/20382993 http://dx.doi.org/10.1107/S0907444910007262 Text en © Holton & Frankel 2010 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
Holton, James M.
Frankel, Kenneth A.
The minimum crystal size needed for a complete diffraction data set
title The minimum crystal size needed for a complete diffraction data set
title_full The minimum crystal size needed for a complete diffraction data set
title_fullStr The minimum crystal size needed for a complete diffraction data set
title_full_unstemmed The minimum crystal size needed for a complete diffraction data set
title_short The minimum crystal size needed for a complete diffraction data set
title_sort minimum crystal size needed for a complete diffraction data set
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2852304/
https://www.ncbi.nlm.nih.gov/pubmed/20382993
http://dx.doi.org/10.1107/S0907444910007262
work_keys_str_mv AT holtonjamesm theminimumcrystalsizeneededforacompletediffractiondataset
AT frankelkennetha theminimumcrystalsizeneededforacompletediffractiondataset
AT holtonjamesm minimumcrystalsizeneededforacompletediffractiondataset
AT frankelkennetha minimumcrystalsizeneededforacompletediffractiondataset