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DotKnot: pseudoknot prediction using the probability dot plot under a refined energy model

RNA pseudoknots are functional structure elements with key roles in viral and cellular processes. Prediction of a pseudoknotted minimum free energy structure is an NP-complete problem. Practical algorithms for RNA structure prediction including restricted classes of pseudoknots suffer from high runt...

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Detalles Bibliográficos
Autores principales: Sperschneider, Jana, Datta, Amitava
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2853144/
https://www.ncbi.nlm.nih.gov/pubmed/20123730
http://dx.doi.org/10.1093/nar/gkq021