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DotKnot: pseudoknot prediction using the probability dot plot under a refined energy model
RNA pseudoknots are functional structure elements with key roles in viral and cellular processes. Prediction of a pseudoknotted minimum free energy structure is an NP-complete problem. Practical algorithms for RNA structure prediction including restricted classes of pseudoknots suffer from high runt...
Autores principales: | Sperschneider, Jana, Datta, Amitava |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2853144/ https://www.ncbi.nlm.nih.gov/pubmed/20123730 http://dx.doi.org/10.1093/nar/gkq021 |
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