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The eNMR platform for structural biology
The e-NMR project is a European cooperation initiative that aims at providing the bio-NMR user community with a software platform integrating and streamlining the computational approaches necessary for the analysis of bio-NMR data. The e-NMR platform is based on a Grid computational infrastructure....
Autores principales: | , , |
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Formato: | Texto |
Lenguaje: | English |
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Springer Netherlands
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2855812/ https://www.ncbi.nlm.nih.gov/pubmed/20229048 http://dx.doi.org/10.1007/s10969-010-9084-9 |
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author | Bonvin, Alexandre M. J. J. Rosato, Antonio Wassenaar, Tsjerk A. |
author_facet | Bonvin, Alexandre M. J. J. Rosato, Antonio Wassenaar, Tsjerk A. |
author_sort | Bonvin, Alexandre M. J. J. |
collection | PubMed |
description | The e-NMR project is a European cooperation initiative that aims at providing the bio-NMR user community with a software platform integrating and streamlining the computational approaches necessary for the analysis of bio-NMR data. The e-NMR platform is based on a Grid computational infrastructure. A main focus of the current implementation of the e-NMR platform is on streamlining structure determination protocols. Indeed, to facilitate the use of NMR spectroscopy in the life sciences, the eNMR consortium has set out to provide protocolized services through easy-to-use web interfaces, while still retaining sufficient flexibility to handle specific requests by expert users. Various programs relevant for structural biology applications are already available through the e-NMR portal, including HADDOCK, XPLOR-NIH, CYANA and csRosetta. The implementation of these services, and in particular the distribution of calculations to the GRID infrastructure, has required the development of specific tools. However, the GRID infrastructure is maintained completely transparent to the users. With more than 150 registered users, eNMR is currently the second largest European Virtual Organization in the life sciences. |
format | Text |
id | pubmed-2855812 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Springer Netherlands |
record_format | MEDLINE/PubMed |
spelling | pubmed-28558122010-04-25 The eNMR platform for structural biology Bonvin, Alexandre M. J. J. Rosato, Antonio Wassenaar, Tsjerk A. J Struct Funct Genomics Article The e-NMR project is a European cooperation initiative that aims at providing the bio-NMR user community with a software platform integrating and streamlining the computational approaches necessary for the analysis of bio-NMR data. The e-NMR platform is based on a Grid computational infrastructure. A main focus of the current implementation of the e-NMR platform is on streamlining structure determination protocols. Indeed, to facilitate the use of NMR spectroscopy in the life sciences, the eNMR consortium has set out to provide protocolized services through easy-to-use web interfaces, while still retaining sufficient flexibility to handle specific requests by expert users. Various programs relevant for structural biology applications are already available through the e-NMR portal, including HADDOCK, XPLOR-NIH, CYANA and csRosetta. The implementation of these services, and in particular the distribution of calculations to the GRID infrastructure, has required the development of specific tools. However, the GRID infrastructure is maintained completely transparent to the users. With more than 150 registered users, eNMR is currently the second largest European Virtual Organization in the life sciences. Springer Netherlands 2010-03-13 2010 /pmc/articles/PMC2855812/ /pubmed/20229048 http://dx.doi.org/10.1007/s10969-010-9084-9 Text en © The Author(s) 2010 https://creativecommons.org/licenses/by-nc/4.0/ This article is distributed under the terms of the Creative Commons Attribution Noncommercial License which permits any noncommercial use, distribution, and reproduction in any medium, provided the original author(s) and source are credited. |
spellingShingle | Article Bonvin, Alexandre M. J. J. Rosato, Antonio Wassenaar, Tsjerk A. The eNMR platform for structural biology |
title | The eNMR platform for structural biology |
title_full | The eNMR platform for structural biology |
title_fullStr | The eNMR platform for structural biology |
title_full_unstemmed | The eNMR platform for structural biology |
title_short | The eNMR platform for structural biology |
title_sort | enmr platform for structural biology |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2855812/ https://www.ncbi.nlm.nih.gov/pubmed/20229048 http://dx.doi.org/10.1007/s10969-010-9084-9 |
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