Cargando…

Marine Metagenomics: New Tools for the Study and Exploitation of Marine Microbial Metabolism

The marine environment is extremely diverse, with huge variations in pressure and temperature. Nevertheless, life, especially microbial life, thrives throughout the marine biosphere and microbes have adapted to all the divergent environments present. Large scale DNA sequence based approaches have re...

Descripción completa

Detalles Bibliográficos
Autores principales: Kennedy, Jonathan, Flemer, Burkhardt, Jackson, Stephen A., Lejon, David P. H., Morrissey, John P., O’Gara, Fergal, Dobson, Alan D. W.
Formato: Texto
Lenguaje:English
Publicado: Molecular Diversity Preservation International 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2857354/
https://www.ncbi.nlm.nih.gov/pubmed/20411118
http://dx.doi.org/10.3390/md8030608
_version_ 1782180318141218816
author Kennedy, Jonathan
Flemer, Burkhardt
Jackson, Stephen A.
Lejon, David P. H.
Morrissey, John P.
O’Gara, Fergal
Dobson, Alan D. W.
author_facet Kennedy, Jonathan
Flemer, Burkhardt
Jackson, Stephen A.
Lejon, David P. H.
Morrissey, John P.
O’Gara, Fergal
Dobson, Alan D. W.
author_sort Kennedy, Jonathan
collection PubMed
description The marine environment is extremely diverse, with huge variations in pressure and temperature. Nevertheless, life, especially microbial life, thrives throughout the marine biosphere and microbes have adapted to all the divergent environments present. Large scale DNA sequence based approaches have recently been used to investigate the marine environment and these studies have revealed that the oceans harbor unprecedented microbial diversity. Novel gene families with representatives only within such metagenomic datasets represent a large proportion of the ocean metagenome. The presence of so many new gene families from these uncultured and highly diverse microbial populations represents a challenge for the understanding of and exploitation of the biology and biochemistry of the ocean environment. The application of new metagenomic and single cell genomics tools offers new ways to explore the complete metabolic diversity of the marine biome.
format Text
id pubmed-2857354
institution National Center for Biotechnology Information
language English
publishDate 2010
publisher Molecular Diversity Preservation International
record_format MEDLINE/PubMed
spelling pubmed-28573542010-04-21 Marine Metagenomics: New Tools for the Study and Exploitation of Marine Microbial Metabolism Kennedy, Jonathan Flemer, Burkhardt Jackson, Stephen A. Lejon, David P. H. Morrissey, John P. O’Gara, Fergal Dobson, Alan D. W. Mar Drugs Review The marine environment is extremely diverse, with huge variations in pressure and temperature. Nevertheless, life, especially microbial life, thrives throughout the marine biosphere and microbes have adapted to all the divergent environments present. Large scale DNA sequence based approaches have recently been used to investigate the marine environment and these studies have revealed that the oceans harbor unprecedented microbial diversity. Novel gene families with representatives only within such metagenomic datasets represent a large proportion of the ocean metagenome. The presence of so many new gene families from these uncultured and highly diverse microbial populations represents a challenge for the understanding of and exploitation of the biology and biochemistry of the ocean environment. The application of new metagenomic and single cell genomics tools offers new ways to explore the complete metabolic diversity of the marine biome. Molecular Diversity Preservation International 2010-03-15 /pmc/articles/PMC2857354/ /pubmed/20411118 http://dx.doi.org/10.3390/md8030608 Text en © 2010 by the authors; licensee Molecular Diversity Preservation International, Basel, Switzerland http://creativecommons.org/licenses/by/3.0 This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Review
Kennedy, Jonathan
Flemer, Burkhardt
Jackson, Stephen A.
Lejon, David P. H.
Morrissey, John P.
O’Gara, Fergal
Dobson, Alan D. W.
Marine Metagenomics: New Tools for the Study and Exploitation of Marine Microbial Metabolism
title Marine Metagenomics: New Tools for the Study and Exploitation of Marine Microbial Metabolism
title_full Marine Metagenomics: New Tools for the Study and Exploitation of Marine Microbial Metabolism
title_fullStr Marine Metagenomics: New Tools for the Study and Exploitation of Marine Microbial Metabolism
title_full_unstemmed Marine Metagenomics: New Tools for the Study and Exploitation of Marine Microbial Metabolism
title_short Marine Metagenomics: New Tools for the Study and Exploitation of Marine Microbial Metabolism
title_sort marine metagenomics: new tools for the study and exploitation of marine microbial metabolism
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2857354/
https://www.ncbi.nlm.nih.gov/pubmed/20411118
http://dx.doi.org/10.3390/md8030608
work_keys_str_mv AT kennedyjonathan marinemetagenomicsnewtoolsforthestudyandexploitationofmarinemicrobialmetabolism
AT flemerburkhardt marinemetagenomicsnewtoolsforthestudyandexploitationofmarinemicrobialmetabolism
AT jacksonstephena marinemetagenomicsnewtoolsforthestudyandexploitationofmarinemicrobialmetabolism
AT lejondavidph marinemetagenomicsnewtoolsforthestudyandexploitationofmarinemicrobialmetabolism
AT morrisseyjohnp marinemetagenomicsnewtoolsforthestudyandexploitationofmarinemicrobialmetabolism
AT ogarafergal marinemetagenomicsnewtoolsforthestudyandexploitationofmarinemicrobialmetabolism
AT dobsonalandw marinemetagenomicsnewtoolsforthestudyandexploitationofmarinemicrobialmetabolism