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EuGène-maize: a web site for maize gene prediction
Motivation:A large part of the maize B73 genome sequence is now available and emerging sequencing technologies will offer cheap and easy ways to sequence areas of interest from many other maize genotypes. One of the steps required to turn these sequences into valuable information is gene content pre...
Autores principales: | , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2859131/ https://www.ncbi.nlm.nih.gov/pubmed/20400755 http://dx.doi.org/10.1093/bioinformatics/btq123 |
Sumario: | Motivation:A large part of the maize B73 genome sequence is now available and emerging sequencing technologies will offer cheap and easy ways to sequence areas of interest from many other maize genotypes. One of the steps required to turn these sequences into valuable information is gene content prediction. To date, there is no publicly available gene predictor specifically trained for maize sequences. To this end, we have chosen to train the EuGène software that can combine several sources of evidence into a consolidated gene model prediction. Availability: http://genome.jouy.inra.fr/eugene/cgi-bin/eugene_form.pl Contact: joets@moulon.inra.fr Supplementary information:Supplementary data are available at Bioinformatics online. |
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