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Cry‐Bt identifier: A biological database for PCR detection of Cry genes present in transgenic plants

We describe the development of a user friendly tool that would assist in the retrieval of information relating to Cry genes in transgenic crops. The tool also helps in detection of transformed Cry genes from Bacillus thuringiensis present in transgenic plants by providing suitable designed primers f...

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Detalles Bibliográficos
Autores principales: Singh, Vinay Kumar, Ambwani, Sonu, Marla, Soma, Kumar, Anil
Formato: Texto
Lenguaje:English
Publicado: Biomedical Informatics Publishing Group 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2859572/
https://www.ncbi.nlm.nih.gov/pubmed/20461155
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author Singh, Vinay Kumar
Ambwani, Sonu
Marla, Soma
Kumar, Anil
author_facet Singh, Vinay Kumar
Ambwani, Sonu
Marla, Soma
Kumar, Anil
author_sort Singh, Vinay Kumar
collection PubMed
description We describe the development of a user friendly tool that would assist in the retrieval of information relating to Cry genes in transgenic crops. The tool also helps in detection of transformed Cry genes from Bacillus thuringiensis present in transgenic plants by providing suitable designed primers for PCR identification of these genes. The tool designed based on relational database model enables easy retrieval of information from the database with simple user queries. The tool also enables users to access related information about Cry genes present in various databases by interacting with different sources (nucleotide sequences, protein sequence, sequence comparison tools, published literature, conserved domains, evolutionary and structural data). AVAILABILITY: http://insilicogenomics.in/Cry-btIdentifier/welcome.html
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spelling pubmed-28595722010-05-11 Cry‐Bt identifier: A biological database for PCR detection of Cry genes present in transgenic plants Singh, Vinay Kumar Ambwani, Sonu Marla, Soma Kumar, Anil Bioinformation Database We describe the development of a user friendly tool that would assist in the retrieval of information relating to Cry genes in transgenic crops. The tool also helps in detection of transformed Cry genes from Bacillus thuringiensis present in transgenic plants by providing suitable designed primers for PCR identification of these genes. The tool designed based on relational database model enables easy retrieval of information from the database with simple user queries. The tool also enables users to access related information about Cry genes present in various databases by interacting with different sources (nucleotide sequences, protein sequence, sequence comparison tools, published literature, conserved domains, evolutionary and structural data). AVAILABILITY: http://insilicogenomics.in/Cry-btIdentifier/welcome.html Biomedical Informatics Publishing Group 2009-10-23 /pmc/articles/PMC2859572/ /pubmed/20461155 Text en © 2009 Biomedical Informatics Publishing Group This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Database
Singh, Vinay Kumar
Ambwani, Sonu
Marla, Soma
Kumar, Anil
Cry‐Bt identifier: A biological database for PCR detection of Cry genes present in transgenic plants
title Cry‐Bt identifier: A biological database for PCR detection of Cry genes present in transgenic plants
title_full Cry‐Bt identifier: A biological database for PCR detection of Cry genes present in transgenic plants
title_fullStr Cry‐Bt identifier: A biological database for PCR detection of Cry genes present in transgenic plants
title_full_unstemmed Cry‐Bt identifier: A biological database for PCR detection of Cry genes present in transgenic plants
title_short Cry‐Bt identifier: A biological database for PCR detection of Cry genes present in transgenic plants
title_sort cry‐bt identifier: a biological database for pcr detection of cry genes present in transgenic plants
topic Database
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2859572/
https://www.ncbi.nlm.nih.gov/pubmed/20461155
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