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Cry‐Bt identifier: A biological database for PCR detection of Cry genes present in transgenic plants
We describe the development of a user friendly tool that would assist in the retrieval of information relating to Cry genes in transgenic crops. The tool also helps in detection of transformed Cry genes from Bacillus thuringiensis present in transgenic plants by providing suitable designed primers f...
Autores principales: | , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Biomedical Informatics Publishing Group
2009
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2859572/ https://www.ncbi.nlm.nih.gov/pubmed/20461155 |
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author | Singh, Vinay Kumar Ambwani, Sonu Marla, Soma Kumar, Anil |
author_facet | Singh, Vinay Kumar Ambwani, Sonu Marla, Soma Kumar, Anil |
author_sort | Singh, Vinay Kumar |
collection | PubMed |
description | We describe the development of a user friendly tool that would assist in the retrieval of information relating to Cry genes in transgenic crops. The tool also helps in detection of transformed Cry genes from Bacillus thuringiensis present in transgenic plants by providing suitable designed primers for PCR identification of these genes. The tool designed based on relational database model enables easy retrieval of information from the database with simple user queries. The tool also enables users to access related information about Cry genes present in various databases by interacting with different sources (nucleotide sequences, protein sequence, sequence comparison tools, published literature, conserved domains, evolutionary and structural data). AVAILABILITY: http://insilicogenomics.in/Cry-btIdentifier/welcome.html |
format | Text |
id | pubmed-2859572 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | Biomedical Informatics Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-28595722010-05-11 Cry‐Bt identifier: A biological database for PCR detection of Cry genes present in transgenic plants Singh, Vinay Kumar Ambwani, Sonu Marla, Soma Kumar, Anil Bioinformation Database We describe the development of a user friendly tool that would assist in the retrieval of information relating to Cry genes in transgenic crops. The tool also helps in detection of transformed Cry genes from Bacillus thuringiensis present in transgenic plants by providing suitable designed primers for PCR identification of these genes. The tool designed based on relational database model enables easy retrieval of information from the database with simple user queries. The tool also enables users to access related information about Cry genes present in various databases by interacting with different sources (nucleotide sequences, protein sequence, sequence comparison tools, published literature, conserved domains, evolutionary and structural data). AVAILABILITY: http://insilicogenomics.in/Cry-btIdentifier/welcome.html Biomedical Informatics Publishing Group 2009-10-23 /pmc/articles/PMC2859572/ /pubmed/20461155 Text en © 2009 Biomedical Informatics Publishing Group This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited. |
spellingShingle | Database Singh, Vinay Kumar Ambwani, Sonu Marla, Soma Kumar, Anil Cry‐Bt identifier: A biological database for PCR detection of Cry genes present in transgenic plants |
title | Cry‐Bt identifier: A biological database for PCR detection of Cry genes present in transgenic plants |
title_full | Cry‐Bt identifier: A biological database for PCR detection of Cry genes present in transgenic plants |
title_fullStr | Cry‐Bt identifier: A biological database for PCR detection of Cry genes present in transgenic plants |
title_full_unstemmed | Cry‐Bt identifier: A biological database for PCR detection of Cry genes present in transgenic plants |
title_short | Cry‐Bt identifier: A biological database for PCR detection of Cry genes present in transgenic plants |
title_sort | cry‐bt identifier: a biological database for pcr detection of cry genes present in transgenic plants |
topic | Database |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2859572/ https://www.ncbi.nlm.nih.gov/pubmed/20461155 |
work_keys_str_mv | AT singhvinaykumar crybtidentifierabiologicaldatabaseforpcrdetectionofcrygenespresentintransgenicplants AT ambwanisonu crybtidentifierabiologicaldatabaseforpcrdetectionofcrygenespresentintransgenicplants AT marlasoma crybtidentifierabiologicaldatabaseforpcrdetectionofcrygenespresentintransgenicplants AT kumaranil crybtidentifierabiologicaldatabaseforpcrdetectionofcrygenespresentintransgenicplants |