Cargando…

Transcriptomic analysis of the venom gland of the red-headed krait (Bungarus flaviceps) using expressed sequence tags

BACKGROUND: The Red-headed krait (Bungarus flaviceps, Squamata: Serpentes: Elapidae) is a medically important venomous snake that inhabits South-East Asia. Although the venoms of most species of the snake genus Bungarus have been well characterized, a detailed compositional analysis of B. flaviceps...

Descripción completa

Detalles Bibliográficos
Autores principales: Siang, Ang Swee, Doley, Robin, Vonk, Freek J, Kini, R Manjunatha
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2861064/
https://www.ncbi.nlm.nih.gov/pubmed/20350308
http://dx.doi.org/10.1186/1471-2199-11-24
_version_ 1782180628953825280
author Siang, Ang Swee
Doley, Robin
Vonk, Freek J
Kini, R Manjunatha
author_facet Siang, Ang Swee
Doley, Robin
Vonk, Freek J
Kini, R Manjunatha
author_sort Siang, Ang Swee
collection PubMed
description BACKGROUND: The Red-headed krait (Bungarus flaviceps, Squamata: Serpentes: Elapidae) is a medically important venomous snake that inhabits South-East Asia. Although the venoms of most species of the snake genus Bungarus have been well characterized, a detailed compositional analysis of B. flaviceps is currently lacking. RESULTS: Here, we have sequenced 845 expressed sequence tags (ESTs) from the venom gland of a B. flaviceps. Of the transcripts, 74.8% were putative toxins; 20.6% were cellular; and 4.6% were unknown. The main venom protein families identified were three-finger toxins (3FTxs), Kunitz-type serine protease inhibitors (including chain B of β-bungarotoxin), phospholipase A(2 )(including chain A of β-bungarotoxin), natriuretic peptide (NP), CRISPs, and C-type lectin. CONCLUSION: The 3FTxs were found to be the major component of the venom (39%). We found eight groups of unique 3FTxs and most of them were different from the well-characterized 3FTxs. We found three groups of Kunitz-type serine protease inhibitors (SPIs); one group was comparable to the classical SPIs and the other two groups to chain B of β-bungarotoxins (with or without the extra cysteine) based on sequence identity. The latter group may be functional equivalents of dendrotoxins in Bungarus venoms. The natriuretic peptide (NP) found is the first NP for any Asian elapid, and distantly related to Australian elapid NPs. Our study identifies several unique toxins in B. flaviceps venom, which may help in understanding the evolution of venom toxins and the pathophysiological symptoms induced after envenomation.
format Text
id pubmed-2861064
institution National Center for Biotechnology Information
language English
publishDate 2010
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-28610642010-04-29 Transcriptomic analysis of the venom gland of the red-headed krait (Bungarus flaviceps) using expressed sequence tags Siang, Ang Swee Doley, Robin Vonk, Freek J Kini, R Manjunatha BMC Mol Biol Research article BACKGROUND: The Red-headed krait (Bungarus flaviceps, Squamata: Serpentes: Elapidae) is a medically important venomous snake that inhabits South-East Asia. Although the venoms of most species of the snake genus Bungarus have been well characterized, a detailed compositional analysis of B. flaviceps is currently lacking. RESULTS: Here, we have sequenced 845 expressed sequence tags (ESTs) from the venom gland of a B. flaviceps. Of the transcripts, 74.8% were putative toxins; 20.6% were cellular; and 4.6% were unknown. The main venom protein families identified were three-finger toxins (3FTxs), Kunitz-type serine protease inhibitors (including chain B of β-bungarotoxin), phospholipase A(2 )(including chain A of β-bungarotoxin), natriuretic peptide (NP), CRISPs, and C-type lectin. CONCLUSION: The 3FTxs were found to be the major component of the venom (39%). We found eight groups of unique 3FTxs and most of them were different from the well-characterized 3FTxs. We found three groups of Kunitz-type serine protease inhibitors (SPIs); one group was comparable to the classical SPIs and the other two groups to chain B of β-bungarotoxins (with or without the extra cysteine) based on sequence identity. The latter group may be functional equivalents of dendrotoxins in Bungarus venoms. The natriuretic peptide (NP) found is the first NP for any Asian elapid, and distantly related to Australian elapid NPs. Our study identifies several unique toxins in B. flaviceps venom, which may help in understanding the evolution of venom toxins and the pathophysiological symptoms induced after envenomation. BioMed Central 2010-03-29 /pmc/articles/PMC2861064/ /pubmed/20350308 http://dx.doi.org/10.1186/1471-2199-11-24 Text en Copyright ©2010 Siang et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research article
Siang, Ang Swee
Doley, Robin
Vonk, Freek J
Kini, R Manjunatha
Transcriptomic analysis of the venom gland of the red-headed krait (Bungarus flaviceps) using expressed sequence tags
title Transcriptomic analysis of the venom gland of the red-headed krait (Bungarus flaviceps) using expressed sequence tags
title_full Transcriptomic analysis of the venom gland of the red-headed krait (Bungarus flaviceps) using expressed sequence tags
title_fullStr Transcriptomic analysis of the venom gland of the red-headed krait (Bungarus flaviceps) using expressed sequence tags
title_full_unstemmed Transcriptomic analysis of the venom gland of the red-headed krait (Bungarus flaviceps) using expressed sequence tags
title_short Transcriptomic analysis of the venom gland of the red-headed krait (Bungarus flaviceps) using expressed sequence tags
title_sort transcriptomic analysis of the venom gland of the red-headed krait (bungarus flaviceps) using expressed sequence tags
topic Research article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2861064/
https://www.ncbi.nlm.nih.gov/pubmed/20350308
http://dx.doi.org/10.1186/1471-2199-11-24
work_keys_str_mv AT siangangswee transcriptomicanalysisofthevenomglandoftheredheadedkraitbungarusflavicepsusingexpressedsequencetags
AT doleyrobin transcriptomicanalysisofthevenomglandoftheredheadedkraitbungarusflavicepsusingexpressedsequencetags
AT vonkfreekj transcriptomicanalysisofthevenomglandoftheredheadedkraitbungarusflavicepsusingexpressedsequencetags
AT kinirmanjunatha transcriptomicanalysisofthevenomglandoftheredheadedkraitbungarusflavicepsusingexpressedsequencetags