Cargando…

(1)H and (13)C resonance assignments of a guanine sensing riboswitch’s terminator hairpin

Here we report the nearly complete base assignments and partial sugar assignments of the 35-residue terminator hairpin of the Bacillus subtilis xpt-pbuX-mRNA guanine sensing riboswitch.

Detalles Bibliográficos
Autores principales:	Ottink, Otmar M., Westerweele, Ivo M., Tesssari, Marco, Nelissen, Frank H. T., Heus, Hans A., Wijmenga, Sybren S.
Formato:	Texto
Lenguaje:	English
Publicado:	Springer Netherlands 2010
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2862169/ https://www.ncbi.nlm.nih.gov/pubmed/20204714 http://dx.doi.org/10.1007/s12104-010-9215-z

Ejemplares similares

Structural and thermodynamic signatures that define pseudotriloop RNA hairpins
por: van der Werf, Ramon, et al.
Publicado: (2013)

Ligand recognition determinants of guanine riboswitches
por: Mulhbacher, Jérôme, et al.
Publicado: (2007)

Multivector Fluorescence Analysis of the xpt Guanine Riboswitch Aptamer Domain and the Conformational Role of Guanine
por: Brenner, Michael D., et al.
Publicado: (2010)

Expanding the toolbox of synthetic riboswitches with guanine-dependent aptazymes
por: Stifel, Julia, et al.
Publicado: (2019)

Molecular dynamics simulation study of the binding of purine bases to the aptamer domain of the guanine sensing riboswitch
por: Villa, Alessandra, et al.
Publicado: (2009)

Ligand-mediated and tertiary interactions cooperatively stabilize the P1 region in the guanine-sensing riboswitch
por: Hanke, Christian A., et al.
Publicado: (2017)

Covalent Bonding of Pyrrolobenzodiazepines (PBDs) to Terminal Guanine Residues within Duplex and Hairpin DNA Fragments
por: Mantaj, Julia, et al.
Publicado: (2016)

Correction to Multivector Fluorescence Analysis of the xpt Guanine Riboswitch Aptamer Domain and the Conformational Role of Guanine
por: Brenner, Michael D., et al.
Publicado: (2010)

Variants of the guanine riboswitch class exhibit altered ligand specificities for xanthine, guanine, or 2′-deoxyguanosine
por: Hamal Dhakal, Siddhartha, et al.
Publicado: (2022)

Thermodynamics and NMR studies on Duck, Heron and Human HBV encapsidation signals
por: Girard, Frederic C., et al.
Publicado: (2007)

Preparation of selective and segmentally labeled single-stranded DNA for NMR by self-primed PCR and asymmetrical endonuclease double digestion
por: Nelissen, Frank H. T., et al.
Publicado: (2009)

Dissecting the influence of Mg(2+) on 3D architecture and ligand-binding of the guanine-sensing riboswitch aptamer domain
por: Buck, Janina, et al.
Publicado: (2010)

Influence of ground-state structure and Mg(2+) binding on folding kinetics of the guanine-sensing riboswitch aptamer domain
por: Buck, Janina, et al.
Publicado: (2011)

Direct Measurement of the Ionization State of an Essential Guanine in the Hairpin Ribozyme
por: Liu, Lu, et al.
Publicado: (2009)

High Affinity Binding of N2-Modified Guanine Derivatives Significantly Disrupts the Ligand Binding Pocket of the Guanine Riboswitch
por: Matyjasik, Michal M., et al.
Publicado: (2020)

Do the P1 and P2 hairpins of the Guanidine-II riboswitch interact?
por: Wuebben, Christine, et al.
Publicado: (2020)

Novel Riboswitch Ligand Analogs as Selective Inhibitors of Guanine-Related Metabolic Pathways
por: Mulhbacher, Jérôme, et al.
Publicado: (2010)

Multiple segmental and selective isotope labeling of large RNA for NMR structural studies
por: Nelissen, Frank H. T., et al.
Publicado: (2008)

Interplay of ‘induced fit’ and preorganization in the ligand induced folding of the aptamer domain of the guanine binding riboswitch
por: Noeske, Jonas, et al.
Publicado: (2007)

Fast production of homogeneous recombinant RNA—towards large-scale production of RNA
por: Nelissen, Frank H.T., et al.
Publicado: (2012)

Effect of mutations on binding of ligands to guanine riboswitch probed by free energy perturbation and molecular dynamics simulations
por: Chen, Jianzhong, et al.
Publicado: (2019)

Formation and properties of hairpin and tetraplex structures of guanine-rich regulatory sequences of muscle-specific genes
por: Yafe, Anat, et al.
Publicado: (2005)

Hierarchical mechanism of amino acid sensing by the T-box riboswitch
por: Suddala, Krishna C., et al.
Publicado: (2018)

Clusters of hairpins induce intrinsic transcription termination in bacteria
por: Gupta, Swati, et al.
Publicado: (2021)

(1)H, (13)C and (15)N resonance assignments of SARS-CoV main protease N-terminal domain
por: Zhang, Shengnan, et al.
Publicado: (2010)

Competitive folding of anti-terminator/terminator hairpins monitored by single molecule FRET
por: Clerte, Caroline, et al.
Publicado: (2013)

De novo design of a synthetic riboswitch that regulates transcription termination
por: Wachsmuth, Manja, et al.
Publicado: (2013)

Ligand-induced stabilization of the aptamer terminal helix in the add adenine riboswitch
por: Di Palma, Francesco, et al.
Publicado: (2013)

Structure and dynamics of the deoxyguanosine-sensing riboswitch studied by NMR-spectroscopy
por: Wacker, Anna, et al.
Publicado: (2011)

Riboswitches in eubacteria sense the second messenger c-di-AMP
por: Nelson, James W., et al.
Publicado: (2013)

Structural basis for guanidine sensing by the ykkC family of riboswitches
por: Battaglia, Robert A., et al.
Publicado: (2017)

Ligand binding to 2΄-deoxyguanosine sensing riboswitch in metabolic context
por: Kim, Yong-Boum, et al.
Publicado: (2017)

Translational control and Rho-dependent transcription termination are intimately linked in riboswitch regulation
por: Bastet, Laurène, et al.
Publicado: (2017)

(1)H, (13)C, and (15)N resonance assignments of the C-terminal lobe of the human HECT E3 ubiquitin ligase ITCH
por: Beasley, Steven A., et al.
Publicado: (2018)

(1)H, (13)C, (15)N resonance assignment of the C-terminal domain of the bifunctional enzyme TraI of plasmid R1
por: Krishna, Bhattiprolu, et al.
Publicado: (2019)

Letter to the Editor: (1)H, (13)C, and (15)N resonance assignments of the N-terminal domain of the SARS CoV nucleocapsid protein
por: Zhong, Nan, et al.
Publicado: (2005)

Singlet glycine riboswitches bind ligand as well as tandem riboswitches
por: Ruff, Karen M., et al.
Publicado: (2016)

Reconsidering the czcD (NiCo) Riboswitch as an Iron Riboswitch
por: Xu, Jiansong, et al.
Publicado: (2022)

(1)H, (15)N, (13)C resonance assignment of human osteopontin
por: Platzer, Gerald, et al.
Publicado: (2015)

Role of the terminator hairpin in the biogenesis of functional Hfq-binding sRNAs
por: Morita, Teppei, et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_p6e9200nvsvbm2n19i7buc4vj7