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Analysis of Transcripts Expressed in One-Day-Old Larvae and Fifth Instar Silk Glands of Tasar Silkworm, Antheraea mylitta
Antheraea mylitta is one of the wild nonmulberry silkworms, which produces tasar silk. An EST project has been undertaken to understand the gene expression profile of A. mylitta silk gland. Two cDNA libraries, one from the whole bodies of one-day-old larvae and the other from the silkglands of fifth...
Autores principales: | , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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Hindawi Publishing Corporation
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2864506/ https://www.ncbi.nlm.nih.gov/pubmed/20454581 http://dx.doi.org/10.1155/2010/246738 |
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author | Maity, Samita Goel, Sagar I. Roy, Sobhan Ghorai, Suvankar Bhattacharyya, Swati Venugopalan, Aravind Ghosh, Ananta K. |
author_facet | Maity, Samita Goel, Sagar I. Roy, Sobhan Ghorai, Suvankar Bhattacharyya, Swati Venugopalan, Aravind Ghosh, Ananta K. |
author_sort | Maity, Samita |
collection | PubMed |
description | Antheraea mylitta is one of the wild nonmulberry silkworms, which produces tasar silk. An EST project has been undertaken to understand the gene expression profile of A. mylitta silk gland. Two cDNA libraries, one from the whole bodies of one-day-old larvae and the other from the silkglands of fifth instar larvae, were constructed and sequenced. A total of 2476 good-quality ESTs (1239 clones) were obtained and grouped into 648 clusters containing 390 contigs and 258 singletons to represent 467 potential unigenes. Forty-five sequences contained putative coding region, and represented potentially novel genes. Among the 648 clusters, 241 were categorized according to Gene Ontology hierarchy and showed presence of several silk and immune-related genes. The A. mylitta ESTs have been organized into a freely available online database “AmyBASE”. These data provide an initial insight into the A. mylitta transcriptome and help to understand the molecular mechanism of silk protein production in a Lepidopteran species. |
format | Text |
id | pubmed-2864506 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-28645062010-05-07 Analysis of Transcripts Expressed in One-Day-Old Larvae and Fifth Instar Silk Glands of Tasar Silkworm, Antheraea mylitta Maity, Samita Goel, Sagar I. Roy, Sobhan Ghorai, Suvankar Bhattacharyya, Swati Venugopalan, Aravind Ghosh, Ananta K. Comp Funct Genomics Research Article Antheraea mylitta is one of the wild nonmulberry silkworms, which produces tasar silk. An EST project has been undertaken to understand the gene expression profile of A. mylitta silk gland. Two cDNA libraries, one from the whole bodies of one-day-old larvae and the other from the silkglands of fifth instar larvae, were constructed and sequenced. A total of 2476 good-quality ESTs (1239 clones) were obtained and grouped into 648 clusters containing 390 contigs and 258 singletons to represent 467 potential unigenes. Forty-five sequences contained putative coding region, and represented potentially novel genes. Among the 648 clusters, 241 were categorized according to Gene Ontology hierarchy and showed presence of several silk and immune-related genes. The A. mylitta ESTs have been organized into a freely available online database “AmyBASE”. These data provide an initial insight into the A. mylitta transcriptome and help to understand the molecular mechanism of silk protein production in a Lepidopteran species. Hindawi Publishing Corporation 2010 2010-05-04 /pmc/articles/PMC2864506/ /pubmed/20454581 http://dx.doi.org/10.1155/2010/246738 Text en Copyright © 2010 Samita Maity et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Maity, Samita Goel, Sagar I. Roy, Sobhan Ghorai, Suvankar Bhattacharyya, Swati Venugopalan, Aravind Ghosh, Ananta K. Analysis of Transcripts Expressed in One-Day-Old Larvae and Fifth Instar Silk Glands of Tasar Silkworm, Antheraea mylitta |
title | Analysis of Transcripts Expressed in One-Day-Old Larvae and Fifth Instar Silk Glands of Tasar Silkworm, Antheraea mylitta
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title_full | Analysis of Transcripts Expressed in One-Day-Old Larvae and Fifth Instar Silk Glands of Tasar Silkworm, Antheraea mylitta
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title_fullStr | Analysis of Transcripts Expressed in One-Day-Old Larvae and Fifth Instar Silk Glands of Tasar Silkworm, Antheraea mylitta
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title_full_unstemmed | Analysis of Transcripts Expressed in One-Day-Old Larvae and Fifth Instar Silk Glands of Tasar Silkworm, Antheraea mylitta
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title_short | Analysis of Transcripts Expressed in One-Day-Old Larvae and Fifth Instar Silk Glands of Tasar Silkworm, Antheraea mylitta
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title_sort | analysis of transcripts expressed in one-day-old larvae and fifth instar silk glands of tasar silkworm, antheraea mylitta |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2864506/ https://www.ncbi.nlm.nih.gov/pubmed/20454581 http://dx.doi.org/10.1155/2010/246738 |
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