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Analysis of Transcripts Expressed in One-Day-Old Larvae and Fifth Instar Silk Glands of Tasar Silkworm, Antheraea mylitta

Antheraea mylitta is one of the wild nonmulberry silkworms, which produces tasar silk. An EST project has been undertaken to understand the gene expression profile of A. mylitta silk gland. Two cDNA libraries, one from the whole bodies of one-day-old larvae and the other from the silkglands of fifth...

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Autores principales: Maity, Samita, Goel, Sagar I., Roy, Sobhan, Ghorai, Suvankar, Bhattacharyya, Swati, Venugopalan, Aravind, Ghosh, Ananta K.
Formato: Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2864506/
https://www.ncbi.nlm.nih.gov/pubmed/20454581
http://dx.doi.org/10.1155/2010/246738
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author Maity, Samita
Goel, Sagar I.
Roy, Sobhan
Ghorai, Suvankar
Bhattacharyya, Swati
Venugopalan, Aravind
Ghosh, Ananta K.
author_facet Maity, Samita
Goel, Sagar I.
Roy, Sobhan
Ghorai, Suvankar
Bhattacharyya, Swati
Venugopalan, Aravind
Ghosh, Ananta K.
author_sort Maity, Samita
collection PubMed
description Antheraea mylitta is one of the wild nonmulberry silkworms, which produces tasar silk. An EST project has been undertaken to understand the gene expression profile of A. mylitta silk gland. Two cDNA libraries, one from the whole bodies of one-day-old larvae and the other from the silkglands of fifth instar larvae, were constructed and sequenced. A total of 2476 good-quality ESTs (1239 clones) were obtained and grouped into 648 clusters containing 390 contigs and 258 singletons to represent 467 potential unigenes. Forty-five sequences contained putative coding region, and represented potentially novel genes. Among the 648 clusters, 241 were categorized according to Gene Ontology hierarchy and showed presence of several silk and immune-related genes. The A. mylitta ESTs have been organized into a freely available online database “AmyBASE”. These data provide an initial insight into the A. mylitta transcriptome and help to understand the molecular mechanism of silk protein production in a Lepidopteran species.
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spelling pubmed-28645062010-05-07 Analysis of Transcripts Expressed in One-Day-Old Larvae and Fifth Instar Silk Glands of Tasar Silkworm, Antheraea mylitta Maity, Samita Goel, Sagar I. Roy, Sobhan Ghorai, Suvankar Bhattacharyya, Swati Venugopalan, Aravind Ghosh, Ananta K. Comp Funct Genomics Research Article Antheraea mylitta is one of the wild nonmulberry silkworms, which produces tasar silk. An EST project has been undertaken to understand the gene expression profile of A. mylitta silk gland. Two cDNA libraries, one from the whole bodies of one-day-old larvae and the other from the silkglands of fifth instar larvae, were constructed and sequenced. A total of 2476 good-quality ESTs (1239 clones) were obtained and grouped into 648 clusters containing 390 contigs and 258 singletons to represent 467 potential unigenes. Forty-five sequences contained putative coding region, and represented potentially novel genes. Among the 648 clusters, 241 were categorized according to Gene Ontology hierarchy and showed presence of several silk and immune-related genes. The A. mylitta ESTs have been organized into a freely available online database “AmyBASE”. These data provide an initial insight into the A. mylitta transcriptome and help to understand the molecular mechanism of silk protein production in a Lepidopteran species. Hindawi Publishing Corporation 2010 2010-05-04 /pmc/articles/PMC2864506/ /pubmed/20454581 http://dx.doi.org/10.1155/2010/246738 Text en Copyright © 2010 Samita Maity et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Maity, Samita
Goel, Sagar I.
Roy, Sobhan
Ghorai, Suvankar
Bhattacharyya, Swati
Venugopalan, Aravind
Ghosh, Ananta K.
Analysis of Transcripts Expressed in One-Day-Old Larvae and Fifth Instar Silk Glands of Tasar Silkworm, Antheraea mylitta
title Analysis of Transcripts Expressed in One-Day-Old Larvae and Fifth Instar Silk Glands of Tasar Silkworm, Antheraea mylitta
title_full Analysis of Transcripts Expressed in One-Day-Old Larvae and Fifth Instar Silk Glands of Tasar Silkworm, Antheraea mylitta
title_fullStr Analysis of Transcripts Expressed in One-Day-Old Larvae and Fifth Instar Silk Glands of Tasar Silkworm, Antheraea mylitta
title_full_unstemmed Analysis of Transcripts Expressed in One-Day-Old Larvae and Fifth Instar Silk Glands of Tasar Silkworm, Antheraea mylitta
title_short Analysis of Transcripts Expressed in One-Day-Old Larvae and Fifth Instar Silk Glands of Tasar Silkworm, Antheraea mylitta
title_sort analysis of transcripts expressed in one-day-old larvae and fifth instar silk glands of tasar silkworm, antheraea mylitta
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2864506/
https://www.ncbi.nlm.nih.gov/pubmed/20454581
http://dx.doi.org/10.1155/2010/246738
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