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Ecological Niche Modeling of Cryptococcus gattii in British Columbia, Canada

BACKGROUND: Cryptococcus gattii emerged on Vancouver Island, British Columbia (BC), Canada, in 1999, causing human and animal illness. Environmental sampling for C. gattii in southwestern BC has isolated the fungal organism from native vegetation, soil, air, and water. OBJECTIVES: Our aim was to hel...

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Autores principales: Mak, Sunny, Klinkenberg, Brian, Bartlett, Karen, Fyfe, Murray
Formato: Texto
Lenguaje:English
Publicado: National Institute of Environmental Health Sciences 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2866681/
https://www.ncbi.nlm.nih.gov/pubmed/20439176
http://dx.doi.org/10.1289/ehp.0901448
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author Mak, Sunny
Klinkenberg, Brian
Bartlett, Karen
Fyfe, Murray
author_facet Mak, Sunny
Klinkenberg, Brian
Bartlett, Karen
Fyfe, Murray
author_sort Mak, Sunny
collection PubMed
description BACKGROUND: Cryptococcus gattii emerged on Vancouver Island, British Columbia (BC), Canada, in 1999, causing human and animal illness. Environmental sampling for C. gattii in southwestern BC has isolated the fungal organism from native vegetation, soil, air, and water. OBJECTIVES: Our aim was to help public health officials in BC delineate where C. gattii is currently established and forecast areas that could support C. gattii in the future. We also examined the utility of ecological niche modeling (ENM) based on human and animal C. gattii disease surveillance data. METHODS: We performed ENM using the Genetic Algorithm for Rule-set Prediction (GARP) to predict the optimal and potential ecological niche areas of C. gattii in BC. Human and animal surveillance and environmental sampling data were used to build and test the models based on 15 predictor environmental data layers. RESULTS: ENM provided very accurate predictions (> 98% accuracy, p-value < 0.001) for C. gattii in BC. The models identified optimal C. gattii ecological niche areas along the central and south eastern coast of Vancouver Island and within the Vancouver Lower Mainland. Elevation, biogeoclimatic zone, and January temperature were good predictors for identifying the ecological niche of C. gattii in BC. CONCLUSIONS: The use of human and animal case data for ENM proved useful and effective in identifying the ecological niche of C. gattii in BC. These results are shared with public health to increase public and physician awareness of cryptococcal disease in regions at risk of environmental colonization of C. gattii.
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spelling pubmed-28666812010-05-26 Ecological Niche Modeling of Cryptococcus gattii in British Columbia, Canada Mak, Sunny Klinkenberg, Brian Bartlett, Karen Fyfe, Murray Environ Health Perspect Research BACKGROUND: Cryptococcus gattii emerged on Vancouver Island, British Columbia (BC), Canada, in 1999, causing human and animal illness. Environmental sampling for C. gattii in southwestern BC has isolated the fungal organism from native vegetation, soil, air, and water. OBJECTIVES: Our aim was to help public health officials in BC delineate where C. gattii is currently established and forecast areas that could support C. gattii in the future. We also examined the utility of ecological niche modeling (ENM) based on human and animal C. gattii disease surveillance data. METHODS: We performed ENM using the Genetic Algorithm for Rule-set Prediction (GARP) to predict the optimal and potential ecological niche areas of C. gattii in BC. Human and animal surveillance and environmental sampling data were used to build and test the models based on 15 predictor environmental data layers. RESULTS: ENM provided very accurate predictions (> 98% accuracy, p-value < 0.001) for C. gattii in BC. The models identified optimal C. gattii ecological niche areas along the central and south eastern coast of Vancouver Island and within the Vancouver Lower Mainland. Elevation, biogeoclimatic zone, and January temperature were good predictors for identifying the ecological niche of C. gattii in BC. CONCLUSIONS: The use of human and animal case data for ENM proved useful and effective in identifying the ecological niche of C. gattii in BC. These results are shared with public health to increase public and physician awareness of cryptococcal disease in regions at risk of environmental colonization of C. gattii. National Institute of Environmental Health Sciences 2010-05 2009-12-17 /pmc/articles/PMC2866681/ /pubmed/20439176 http://dx.doi.org/10.1289/ehp.0901448 Text en http://creativecommons.org/publicdomain/mark/1.0/ Publication of EHP lies in the public domain and is therefore without copyright. All text from EHP may be reprinted freely. Use of materials published in EHP should be acknowledged (for example, ?Reproduced with permission from Environmental Health Perspectives?); pertinent reference information should be provided for the article from which the material was reproduced. Articles from EHP, especially the News section, may contain photographs or illustrations copyrighted by other commercial organizations or individuals that may not be used without obtaining prior approval from the holder of the copyright.
spellingShingle Research
Mak, Sunny
Klinkenberg, Brian
Bartlett, Karen
Fyfe, Murray
Ecological Niche Modeling of Cryptococcus gattii in British Columbia, Canada
title Ecological Niche Modeling of Cryptococcus gattii in British Columbia, Canada
title_full Ecological Niche Modeling of Cryptococcus gattii in British Columbia, Canada
title_fullStr Ecological Niche Modeling of Cryptococcus gattii in British Columbia, Canada
title_full_unstemmed Ecological Niche Modeling of Cryptococcus gattii in British Columbia, Canada
title_short Ecological Niche Modeling of Cryptococcus gattii in British Columbia, Canada
title_sort ecological niche modeling of cryptococcus gattii in british columbia, canada
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2866681/
https://www.ncbi.nlm.nih.gov/pubmed/20439176
http://dx.doi.org/10.1289/ehp.0901448
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