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Vibrio chromosomes share common history
BACKGROUND: While most gamma proteobacteria have a single circular chromosome, Vibrionales have two circular chromosomes. Horizontal gene transfer is common among Vibrios, and in light of this genetic mobility, it is an open question to what extent the two chromosomes themselves share a common histo...
Autores principales: | , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2875227/ https://www.ncbi.nlm.nih.gov/pubmed/20459749 http://dx.doi.org/10.1186/1471-2180-10-137 |
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author | Kirkup, Benjamin C Chang, LeeAnn Chang, Sarah Gevers, Dirk Polz, Martin F |
author_facet | Kirkup, Benjamin C Chang, LeeAnn Chang, Sarah Gevers, Dirk Polz, Martin F |
author_sort | Kirkup, Benjamin C |
collection | PubMed |
description | BACKGROUND: While most gamma proteobacteria have a single circular chromosome, Vibrionales have two circular chromosomes. Horizontal gene transfer is common among Vibrios, and in light of this genetic mobility, it is an open question to what extent the two chromosomes themselves share a common history since their formation. RESULTS: Single copy genes from each chromosome (142 genes from chromosome I and 42 genes from chromosome II) were identified from 19 sequenced Vibrionales genomes and their phylogenetic comparison suggests consistent phylogenies for each chromosome. Additionally, study of the gene organization and phylogeny of the respective origins of replication confirmed the shared history. CONCLUSIONS: Thus, while elements within the chromosomes may have experienced significant genetic mobility, the backbones share a common history. This allows conclusions based on multilocus sequence analysis (MLSA) for one chromosome to be applied equally to both chromosomes. |
format | Text |
id | pubmed-2875227 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-28752272010-05-25 Vibrio chromosomes share common history Kirkup, Benjamin C Chang, LeeAnn Chang, Sarah Gevers, Dirk Polz, Martin F BMC Microbiol Research article BACKGROUND: While most gamma proteobacteria have a single circular chromosome, Vibrionales have two circular chromosomes. Horizontal gene transfer is common among Vibrios, and in light of this genetic mobility, it is an open question to what extent the two chromosomes themselves share a common history since their formation. RESULTS: Single copy genes from each chromosome (142 genes from chromosome I and 42 genes from chromosome II) were identified from 19 sequenced Vibrionales genomes and their phylogenetic comparison suggests consistent phylogenies for each chromosome. Additionally, study of the gene organization and phylogeny of the respective origins of replication confirmed the shared history. CONCLUSIONS: Thus, while elements within the chromosomes may have experienced significant genetic mobility, the backbones share a common history. This allows conclusions based on multilocus sequence analysis (MLSA) for one chromosome to be applied equally to both chromosomes. BioMed Central 2010-05-10 /pmc/articles/PMC2875227/ /pubmed/20459749 http://dx.doi.org/10.1186/1471-2180-10-137 Text en Copyright ©2010 Kirkup et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research article Kirkup, Benjamin C Chang, LeeAnn Chang, Sarah Gevers, Dirk Polz, Martin F Vibrio chromosomes share common history |
title | Vibrio chromosomes share common history |
title_full | Vibrio chromosomes share common history |
title_fullStr | Vibrio chromosomes share common history |
title_full_unstemmed | Vibrio chromosomes share common history |
title_short | Vibrio chromosomes share common history |
title_sort | vibrio chromosomes share common history |
topic | Research article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2875227/ https://www.ncbi.nlm.nih.gov/pubmed/20459749 http://dx.doi.org/10.1186/1471-2180-10-137 |
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