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Vibrio chromosomes share common history

BACKGROUND: While most gamma proteobacteria have a single circular chromosome, Vibrionales have two circular chromosomes. Horizontal gene transfer is common among Vibrios, and in light of this genetic mobility, it is an open question to what extent the two chromosomes themselves share a common histo...

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Detalles Bibliográficos
Autores principales: Kirkup, Benjamin C, Chang, LeeAnn, Chang, Sarah, Gevers, Dirk, Polz, Martin F
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2875227/
https://www.ncbi.nlm.nih.gov/pubmed/20459749
http://dx.doi.org/10.1186/1471-2180-10-137
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author Kirkup, Benjamin C
Chang, LeeAnn
Chang, Sarah
Gevers, Dirk
Polz, Martin F
author_facet Kirkup, Benjamin C
Chang, LeeAnn
Chang, Sarah
Gevers, Dirk
Polz, Martin F
author_sort Kirkup, Benjamin C
collection PubMed
description BACKGROUND: While most gamma proteobacteria have a single circular chromosome, Vibrionales have two circular chromosomes. Horizontal gene transfer is common among Vibrios, and in light of this genetic mobility, it is an open question to what extent the two chromosomes themselves share a common history since their formation. RESULTS: Single copy genes from each chromosome (142 genes from chromosome I and 42 genes from chromosome II) were identified from 19 sequenced Vibrionales genomes and their phylogenetic comparison suggests consistent phylogenies for each chromosome. Additionally, study of the gene organization and phylogeny of the respective origins of replication confirmed the shared history. CONCLUSIONS: Thus, while elements within the chromosomes may have experienced significant genetic mobility, the backbones share a common history. This allows conclusions based on multilocus sequence analysis (MLSA) for one chromosome to be applied equally to both chromosomes.
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spelling pubmed-28752272010-05-25 Vibrio chromosomes share common history Kirkup, Benjamin C Chang, LeeAnn Chang, Sarah Gevers, Dirk Polz, Martin F BMC Microbiol Research article BACKGROUND: While most gamma proteobacteria have a single circular chromosome, Vibrionales have two circular chromosomes. Horizontal gene transfer is common among Vibrios, and in light of this genetic mobility, it is an open question to what extent the two chromosomes themselves share a common history since their formation. RESULTS: Single copy genes from each chromosome (142 genes from chromosome I and 42 genes from chromosome II) were identified from 19 sequenced Vibrionales genomes and their phylogenetic comparison suggests consistent phylogenies for each chromosome. Additionally, study of the gene organization and phylogeny of the respective origins of replication confirmed the shared history. CONCLUSIONS: Thus, while elements within the chromosomes may have experienced significant genetic mobility, the backbones share a common history. This allows conclusions based on multilocus sequence analysis (MLSA) for one chromosome to be applied equally to both chromosomes. BioMed Central 2010-05-10 /pmc/articles/PMC2875227/ /pubmed/20459749 http://dx.doi.org/10.1186/1471-2180-10-137 Text en Copyright ©2010 Kirkup et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research article
Kirkup, Benjamin C
Chang, LeeAnn
Chang, Sarah
Gevers, Dirk
Polz, Martin F
Vibrio chromosomes share common history
title Vibrio chromosomes share common history
title_full Vibrio chromosomes share common history
title_fullStr Vibrio chromosomes share common history
title_full_unstemmed Vibrio chromosomes share common history
title_short Vibrio chromosomes share common history
title_sort vibrio chromosomes share common history
topic Research article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2875227/
https://www.ncbi.nlm.nih.gov/pubmed/20459749
http://dx.doi.org/10.1186/1471-2180-10-137
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