Cargando…

The structure of DdrB from Deinococcus: a new fold for single-stranded DNA binding proteins

Deinococcus spp. are renowned for their amazing ability to recover rapidly from severe genomic fragmentation as a result of exposure to extreme levels of ionizing radiation or desiccation. Despite having been originally characterized over 50 years ago, the mechanism underlying this remarkable repair...

Descripción completa

Detalles Bibliográficos
Autores principales:	Sugiman-Marangos, Seiji, Junop, Murray S.
Formato:	Texto
Lenguaje:	English
Publicado:	Oxford University Press 2010
Materias:	Structural Biology
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2879517/ https://www.ncbi.nlm.nih.gov/pubmed/20129942 http://dx.doi.org/10.1093/nar/gkq036

Ejemplares similares

Crystal structure of the DdrB/ssDNA complex from Deinococcus radiodurans reveals a DNA binding surface involving higher-order oligomeric states
por: Sugiman-Marangos, Seiji N., et al.
Publicado: (2013)

Crystal structure of the transcriptional repressor DdrO: insight into the metalloprotease/repressor-controlled radiation response in Deinococcus
por: de Groot, Arjan, et al.
Publicado: (2019)

The Deinococcus radiodurans DR1245 Protein, a DdrB Partner Homologous to YbjN Proteins and Reminiscent of Type III Secretion System Chaperones
por: Norais, Cédric, et al.
Publicado: (2013)

Natural Transformation in Deinococcus radiodurans: A Genetic Analysis Reveals the Major Roles of DprA, DdrB, RecA, RecF, and RecO Proteins
por: Ithurbide, Solenne, et al.
Publicado: (2020)

Structural and phylogenetic analysis of a conserved actinobacteria-specific protein (ASP1; SCO1997) from Streptomyces coelicolor
por: Gao, Beile, et al.
Publicado: (2009)

Mechanism of RecO recruitment to DNA by single-stranded DNA binding protein
por: Ryzhikov, Mikhail, et al.
Publicado: (2011)

Entrapment of DNA in an intersubunit tunnel system of a single-stranded DNA-binding protein
por: Ghalei, Homa, et al.
Publicado: (2014)

The single-stranded DNA-binding protein of Deinococcus radiodurans
por: Eggington, Julie Malia, et al.
Publicado: (2004)

Structural transitions during the cooperative assembly of baculovirus single-stranded DNA-binding protein on ssDNA
por: Yin, Jiayi, et al.
Publicado: (2022)

Structure and DNA damage-dependent derepression mechanism for the XRE family member DG-DdrO
por: Lu, Huizhi, et al.
Publicado: (2019)

A human XRCC4–XLF complex bridges DNA
por: Andres, Sara N., et al.
Publicado: (2012)

Crystal structure of DnaT(84–153)-dT10 ssDNA complex reveals a novel single-stranded DNA binding mode
por: Liu, Zheng, et al.
Publicado: (2014)

Intramolecular binding mode of the C-terminus of Escherichia coli single-stranded DNA binding protein determined by nuclear magnetic resonance spectroscopy
por: Shishmarev, Dmitry, et al.
Publicado: (2014)

Structural and functional characterization of DdrC, a novel DNA damage-induced nucleoid associated protein involved in DNA compaction
por: Banneville, Anne-Sophie, et al.
Publicado: (2022)

Complexed crystal structure of replication restart primosome protein PriB reveals a novel single-stranded DNA-binding mode
por: Huang, Cheng-Yang, et al.
Publicado: (2006)

Mechanical diversity and folding intermediates of parallel-stranded G-quadruplexes with a bulge
por: Zhang, Yashuo, et al.
Publicado: (2021)

3D structure of Thermus aquaticus single-stranded DNA–binding protein gives insight into the functioning of SSB proteins
por: Fedorov, Roman, et al.
Publicado: (2006)

Distortion of double-stranded DNA structure by the binding of the restriction DNA glycosylase R.PabI
por: Miyazono, Ken-ichi, et al.
Publicado: (2020)

Twisting of the DNA-binding surface by a β-strand-bearing proline modulates DNA gyrase activity
por: Hsieh, Tung-Ju, et al.
Publicado: (2010)

Electron attachment to DNA single strands: gas phase and aqueous solution
por: Gu, Jiande, et al.
Publicado: (2007)

Recognition of T-rich single-stranded DNA by the cold shock protein Bs-CspB in solution
por: Zeeb, Markus, et al.
Publicado: (2006)

Two-quartet kit* G-quadruplex is formed via double-stranded pre-folded structure
por: Kotar, Anita, et al.
Publicado: (2019)

Double-strand DNA end-binding and sliding of the toroidal CRISPR-associated protein Csn2
por: Arslan, Zihni, et al.
Publicado: (2013)

Single-stranded DNA-binding protein of Deinococcus radiodurans: a biophysical characterization
por: Witte, Gregor, et al.
Publicado: (2005)

The crystal structure of a replicative hexameric helicase DnaC and its complex with single-stranded DNA
por: Lo, Yu-Hua, et al.
Publicado: (2009)

Structural dynamics of E. coli single-stranded DNA binding protein reveal DNA wrapping and unwrapping pathways
por: Suksombat, Sukrit, et al.
Publicado: (2015)

Structure and function of the regulatory C-terminal HRDC domain from Deinococcus radiodurans RecQ
por: Killoran, Michael P., et al.
Publicado: (2008)

A novel zinc-binding fold in the helicase interaction domain of the Bacillus subtilis DnaI helicase loader
por: Loscha, Karin V., et al.
Publicado: (2009)

Folding and misfolding pathways of G-quadruplex DNA
por: Marchand, Adrien, et al.
Publicado: (2016)

Elastic properties and secondary structure formation of single-stranded DNA at monovalent and divalent salt conditions
por: Bosco, Alessandro, et al.
Publicado: (2014)

Structures of apo- and ssDNA-bound YdbC from Lactococcus lactis uncover the function of protein domain family DUF2128 and expand the single-stranded DNA-binding domain proteome
por: Rossi, Paolo, et al.
Publicado: (2013)

An intercalation-locked parallel-stranded DNA tetraplex
por: Tripathi, Shailesh, et al.
Publicado: (2015)

The crystal structure of the DNA-binding domain of vIRF-1 from the oncogenic KSHV reveals a conserved fold for DNA binding and reinforces its role as a transcription factor
por: Hew, Kelly, et al.
Publicado: (2013)

Switch-like control of helicase processivity by single-stranded DNA binding protein
por: Stekas, Barbara, et al.
Publicado: (2021)

Euler buckling and nonlinear kinking of double-stranded DNA
por: Fields, Alexander P., et al.
Publicado: (2013)

Structural dynamics of double-stranded DNA with epigenome modification
por: Furukawa, Ayako, et al.
Publicado: (2020)

Molecular basis of abasic site sensing in single-stranded DNA by the SRAP domain of E. coli yedK
por: Wang, Na, et al.
Publicado: (2019)

The RAGNYA fold: a novel fold with multiple topological variants found in functionally diverse nucleic acid, nucleotide and peptide-binding proteins
por: Balaji, S., et al.
Publicado: (2007)

NMR-based method of small changes reveals how DNA mutator APOBEC3A interacts with its single-stranded DNA substrate
por: Harjes, Stefan, et al.
Publicado: (2017)

HU binds and folds single-stranded DNA
por: Kamashev, Dmitri, et al.
Publicado: (2008)

Cannot write session to /tmp/vufind_sessions/sess_44bjhrn5nu76osfql7k1jguor9