A low-polynomial algorithm for assembling clusters of orthologous groups from intergenomic symmetric best matches

Motivation: Identifying orthologous genes in multiple genomes is a fundamental task in comparative genomics. Construction of intergenomic symmetrical best matches (SymBets) and joining them into clusters is a popular method of ortholog definition, embodied in several software programs. Despite their...

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Detalles Bibliográficos
Autores principales: Kristensen, David M., Kannan, Lavanya, Coleman, Michael K., Wolf, Yuri I., Sorokin, Alexander, Koonin, Eugene V., Mushegian, Arcady
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2010
Materias:
Original Papers
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2881409/
https://www.ncbi.nlm.nih.gov/pubmed/20439257
http://dx.doi.org/10.1093/bioinformatics/btq229

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2881409/
https://www.ncbi.nlm.nih.gov/pubmed/20439257
http://dx.doi.org/10.1093/bioinformatics/btq229

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