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Validation of the GenoType(® )MTBDRplus assay for detection of MDR-TB in a public health laboratory in Thailand

BACKGROUND: Over the past several years, new diagnostic techniques have been developed to allow for the rapid detection of multidrug resistant tuberculosis. The GenoType(® )MTBDRplus test is a deoxyribonucleic acid (DNA) strip assay which uses polymerase chain reaction (PCR) and hybridization to det...

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Autores principales: Anek-vorapong, Rapeepun, Sinthuwattanawibool, Chalinthorn, Podewils, Laura Jean, McCarthy, Kimberly, Ngamlert, Keerataya, Promsarin, Busakorn, Varma, Jay K
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2886057/
https://www.ncbi.nlm.nih.gov/pubmed/20487550
http://dx.doi.org/10.1186/1471-2334-10-123
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author Anek-vorapong, Rapeepun
Sinthuwattanawibool, Chalinthorn
Podewils, Laura Jean
McCarthy, Kimberly
Ngamlert, Keerataya
Promsarin, Busakorn
Varma, Jay K
author_facet Anek-vorapong, Rapeepun
Sinthuwattanawibool, Chalinthorn
Podewils, Laura Jean
McCarthy, Kimberly
Ngamlert, Keerataya
Promsarin, Busakorn
Varma, Jay K
author_sort Anek-vorapong, Rapeepun
collection PubMed
description BACKGROUND: Over the past several years, new diagnostic techniques have been developed to allow for the rapid detection of multidrug resistant tuberculosis. The GenoType(® )MTBDRplus test is a deoxyribonucleic acid (DNA) strip assay which uses polymerase chain reaction (PCR) and hybridization to detect genetic mutations in the genes that confer isoniazid (INH) and rifampn (RIF) resistance. This assay has demonstrated good performance and a rapid time to results, making this a promising tool to accelerate MDR-TB diagnosis and improve MDR-TB control. Validation of rapid tests for MDR-TB detection in different settings is needed to ensure acceptable performance, particularly in Asia, which has the largest number of MDR-TB cases in the world but only one previous report, in Vietnam, about the performance of the GenoType(® )MDRplus assay. Thailand is ranked 18(th )of 22 "high-burden" TB countries in the world, and there is evidence to suggest that rates of MDR-TB are increasing in Thailand. We compared the performance of the GenoType(® )MTBDRplus assay to Mycobacterial Growth Indicator Tube for Antimycobacterial Susceptibility Testing (MGIT AST) for detection INH resistance, RIF resistance, and MDR-TB in stored acid-fast bacilli (AFB)-positive sputum specimens and isolates at a Public TB laboratory in Bangkok, Thailand. METHODS: 50 stored isolates and 164 stored AFB-positive sputum specimens were tested using both the MGIT AST and the GenoType(® )MTBDRplus assay. RESULTS: The GenoType(® )MTBDRplus assay had a sensitivity of 95.3%, 100%, and 94.4% for INH resistance, RIF resistance, and MDR-TB, respectively. The difference in sensitivity between sputum specimens (93%) and isolates (100%) for INH resistance was not statistically significant (p = 0.08). Specificity was 100% for all resistance patterns and for both specimens and isolates. The laboratory processing time was a median of 25 days for MGIT AST and 5 days for the GenoType(® )MTBDRplus (p < 0.01). CONCLUSION: The GenoType(® )MTBDRplus assay has been validated as a rapid and reliable first-line diagnostic test on AFB-positive sputum or MTB isolates for INH resistance, RIF resistance, and MDR-TB in Bangkok, Thailand. Further studies are needed to evaluate its impact on treatment outcome and the feasibility and cost associated with widespread implementation.
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spelling pubmed-28860572010-06-16 Validation of the GenoType(® )MTBDRplus assay for detection of MDR-TB in a public health laboratory in Thailand Anek-vorapong, Rapeepun Sinthuwattanawibool, Chalinthorn Podewils, Laura Jean McCarthy, Kimberly Ngamlert, Keerataya Promsarin, Busakorn Varma, Jay K BMC Infect Dis Research Article BACKGROUND: Over the past several years, new diagnostic techniques have been developed to allow for the rapid detection of multidrug resistant tuberculosis. The GenoType(® )MTBDRplus test is a deoxyribonucleic acid (DNA) strip assay which uses polymerase chain reaction (PCR) and hybridization to detect genetic mutations in the genes that confer isoniazid (INH) and rifampn (RIF) resistance. This assay has demonstrated good performance and a rapid time to results, making this a promising tool to accelerate MDR-TB diagnosis and improve MDR-TB control. Validation of rapid tests for MDR-TB detection in different settings is needed to ensure acceptable performance, particularly in Asia, which has the largest number of MDR-TB cases in the world but only one previous report, in Vietnam, about the performance of the GenoType(® )MDRplus assay. Thailand is ranked 18(th )of 22 "high-burden" TB countries in the world, and there is evidence to suggest that rates of MDR-TB are increasing in Thailand. We compared the performance of the GenoType(® )MTBDRplus assay to Mycobacterial Growth Indicator Tube for Antimycobacterial Susceptibility Testing (MGIT AST) for detection INH resistance, RIF resistance, and MDR-TB in stored acid-fast bacilli (AFB)-positive sputum specimens and isolates at a Public TB laboratory in Bangkok, Thailand. METHODS: 50 stored isolates and 164 stored AFB-positive sputum specimens were tested using both the MGIT AST and the GenoType(® )MTBDRplus assay. RESULTS: The GenoType(® )MTBDRplus assay had a sensitivity of 95.3%, 100%, and 94.4% for INH resistance, RIF resistance, and MDR-TB, respectively. The difference in sensitivity between sputum specimens (93%) and isolates (100%) for INH resistance was not statistically significant (p = 0.08). Specificity was 100% for all resistance patterns and for both specimens and isolates. The laboratory processing time was a median of 25 days for MGIT AST and 5 days for the GenoType(® )MTBDRplus (p < 0.01). CONCLUSION: The GenoType(® )MTBDRplus assay has been validated as a rapid and reliable first-line diagnostic test on AFB-positive sputum or MTB isolates for INH resistance, RIF resistance, and MDR-TB in Bangkok, Thailand. Further studies are needed to evaluate its impact on treatment outcome and the feasibility and cost associated with widespread implementation. BioMed Central 2010-05-20 /pmc/articles/PMC2886057/ /pubmed/20487550 http://dx.doi.org/10.1186/1471-2334-10-123 Text en Copyright ©2010 Anek-vorapong et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Anek-vorapong, Rapeepun
Sinthuwattanawibool, Chalinthorn
Podewils, Laura Jean
McCarthy, Kimberly
Ngamlert, Keerataya
Promsarin, Busakorn
Varma, Jay K
Validation of the GenoType(® )MTBDRplus assay for detection of MDR-TB in a public health laboratory in Thailand
title Validation of the GenoType(® )MTBDRplus assay for detection of MDR-TB in a public health laboratory in Thailand
title_full Validation of the GenoType(® )MTBDRplus assay for detection of MDR-TB in a public health laboratory in Thailand
title_fullStr Validation of the GenoType(® )MTBDRplus assay for detection of MDR-TB in a public health laboratory in Thailand
title_full_unstemmed Validation of the GenoType(® )MTBDRplus assay for detection of MDR-TB in a public health laboratory in Thailand
title_short Validation of the GenoType(® )MTBDRplus assay for detection of MDR-TB in a public health laboratory in Thailand
title_sort validation of the genotype(® )mtbdrplus assay for detection of mdr-tb in a public health laboratory in thailand
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2886057/
https://www.ncbi.nlm.nih.gov/pubmed/20487550
http://dx.doi.org/10.1186/1471-2334-10-123
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