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Association of TNF-α gene with spontaneous deep intracerebral hemorrhage in the Taiwan population: a case control study
BACKGROUND: Genetic factors may play a role in susceptibility to spontaneous deep intracerebral hemorrhage (SDICH). Previous studies have shown that TNF-α gene variation was associated with risks of subarachnoid hemorrhage in multiple ethnicities. The present case-control study tested the hypothesis...
Autores principales: | , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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BioMed Central
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2891694/ https://www.ncbi.nlm.nih.gov/pubmed/20534169 http://dx.doi.org/10.1186/1471-2377-10-41 |
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author | Chen, Yi-Chun Hu, Fen-Ju Chen, Phoebe Wu, Yih-Ru Wu, Hsiu-Chuan Chen, Sien-Tsong Lee-Chen, Guey-Jen Chen, Chiung-Mei |
author_facet | Chen, Yi-Chun Hu, Fen-Ju Chen, Phoebe Wu, Yih-Ru Wu, Hsiu-Chuan Chen, Sien-Tsong Lee-Chen, Guey-Jen Chen, Chiung-Mei |
author_sort | Chen, Yi-Chun |
collection | PubMed |
description | BACKGROUND: Genetic factors may play a role in susceptibility to spontaneous deep intracerebral hemorrhage (SDICH). Previous studies have shown that TNF-α gene variation was associated with risks of subarachnoid hemorrhage in multiple ethnicities. The present case-control study tested the hypothesis that genetic variations of the TNF-α gene may affect the risk of Taiwanese SDICH. We examined the association of SDICH risks with four single nucleotide polymorphisms (SNPs) within the TNF-α gene promoter, namely T-1031C, C-863A, C-857T, and G-308A. METHODS: Genotyping was determined by PCR-based restriction and electrophoresis assay for 260 SDICH patients and 368 controls. Associations were tested by logistic regression or general linear models with adjusting for multiple covariables in each gender group, and then in combined. Multiplicative terms of gender and each of the four SNPs were applied to detect the interaction effects on SDICH risks. To account for the multiple testing, permutation testing of 1,000 replicates was performed for empirical estimates. RESULTS: In an additive model, SDICH risks were positively associated with the minor alleles -1031C and -308A in men (OR = 1.9, 95% CI 1.1 to 3.4, p = 0.03 and OR = 2.6, 95% CI 1.3 to 5.3, p = 0.005, respectively) but inversely associated with -863A in females (OR = 0.5, 95% CI 0.2 to 0.9, p = 0.03). There were significant interaction effects between gender and SNP on SDICH risks regarding SNPs T-1031C, C-863A, and G-308A (p = 0.005, 0.005, and 0.007, respectively). Hemorrhage size was inversely associated with -857T in males (p = 0.04). CONCLUSIONS: In the Taiwan population, the associations of genetic variations in the TNF-α gene promoter with SDICH risks are gender-dependent. |
format | Text |
id | pubmed-2891694 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-28916942010-06-25 Association of TNF-α gene with spontaneous deep intracerebral hemorrhage in the Taiwan population: a case control study Chen, Yi-Chun Hu, Fen-Ju Chen, Phoebe Wu, Yih-Ru Wu, Hsiu-Chuan Chen, Sien-Tsong Lee-Chen, Guey-Jen Chen, Chiung-Mei BMC Neurol Research article BACKGROUND: Genetic factors may play a role in susceptibility to spontaneous deep intracerebral hemorrhage (SDICH). Previous studies have shown that TNF-α gene variation was associated with risks of subarachnoid hemorrhage in multiple ethnicities. The present case-control study tested the hypothesis that genetic variations of the TNF-α gene may affect the risk of Taiwanese SDICH. We examined the association of SDICH risks with four single nucleotide polymorphisms (SNPs) within the TNF-α gene promoter, namely T-1031C, C-863A, C-857T, and G-308A. METHODS: Genotyping was determined by PCR-based restriction and electrophoresis assay for 260 SDICH patients and 368 controls. Associations were tested by logistic regression or general linear models with adjusting for multiple covariables in each gender group, and then in combined. Multiplicative terms of gender and each of the four SNPs were applied to detect the interaction effects on SDICH risks. To account for the multiple testing, permutation testing of 1,000 replicates was performed for empirical estimates. RESULTS: In an additive model, SDICH risks were positively associated with the minor alleles -1031C and -308A in men (OR = 1.9, 95% CI 1.1 to 3.4, p = 0.03 and OR = 2.6, 95% CI 1.3 to 5.3, p = 0.005, respectively) but inversely associated with -863A in females (OR = 0.5, 95% CI 0.2 to 0.9, p = 0.03). There were significant interaction effects between gender and SNP on SDICH risks regarding SNPs T-1031C, C-863A, and G-308A (p = 0.005, 0.005, and 0.007, respectively). Hemorrhage size was inversely associated with -857T in males (p = 0.04). CONCLUSIONS: In the Taiwan population, the associations of genetic variations in the TNF-α gene promoter with SDICH risks are gender-dependent. BioMed Central 2010-06-10 /pmc/articles/PMC2891694/ /pubmed/20534169 http://dx.doi.org/10.1186/1471-2377-10-41 Text en Copyright ©2010 Chen et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research article Chen, Yi-Chun Hu, Fen-Ju Chen, Phoebe Wu, Yih-Ru Wu, Hsiu-Chuan Chen, Sien-Tsong Lee-Chen, Guey-Jen Chen, Chiung-Mei Association of TNF-α gene with spontaneous deep intracerebral hemorrhage in the Taiwan population: a case control study |
title | Association of TNF-α gene with spontaneous deep intracerebral hemorrhage in the Taiwan population: a case control study |
title_full | Association of TNF-α gene with spontaneous deep intracerebral hemorrhage in the Taiwan population: a case control study |
title_fullStr | Association of TNF-α gene with spontaneous deep intracerebral hemorrhage in the Taiwan population: a case control study |
title_full_unstemmed | Association of TNF-α gene with spontaneous deep intracerebral hemorrhage in the Taiwan population: a case control study |
title_short | Association of TNF-α gene with spontaneous deep intracerebral hemorrhage in the Taiwan population: a case control study |
title_sort | association of tnf-α gene with spontaneous deep intracerebral hemorrhage in the taiwan population: a case control study |
topic | Research article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2891694/ https://www.ncbi.nlm.nih.gov/pubmed/20534169 http://dx.doi.org/10.1186/1471-2377-10-41 |
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