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A dynamic estimation of the daily cumulative cases during infectious disease surveillance: application to dengue fever

BACKGROUND: In infectious disease surveillance, when the laboratory confirmation of the cases is time-consuming, there is often a time lag between the number of suspect cases and the number of confirmed cases. This study proposes a dynamic statistical model to estimate the daily number of new cases...

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Autores principales: Chuang, Pei-Hung, Chuang, Jen-Hsiang, Lin, I-Feng
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2894833/
https://www.ncbi.nlm.nih.gov/pubmed/20504379
http://dx.doi.org/10.1186/1471-2334-10-136
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author Chuang, Pei-Hung
Chuang, Jen-Hsiang
Lin, I-Feng
author_facet Chuang, Pei-Hung
Chuang, Jen-Hsiang
Lin, I-Feng
author_sort Chuang, Pei-Hung
collection PubMed
description BACKGROUND: In infectious disease surveillance, when the laboratory confirmation of the cases is time-consuming, there is often a time lag between the number of suspect cases and the number of confirmed cases. This study proposes a dynamic statistical model to estimate the daily number of new cases and the daily cumulative number of infected cases, which was then applied to historic dengue fever data. METHODS: The duration between the date of disease onset and date of laboratory confirmation was assumed to follow a gamma distribution or a nonparametric distribution. A conditional probability of a case being a real case among the unconfirmed cases on a given date was then calculated. This probability along with the observed confirmed cases was integrated to estimate the daily number of new cases and the cumulative number of infected cases. RESULTS: The distribution of the onset-to-confirmation time for the positive cases was different from that of the negative cases. The daily new cases and cumulative epidemic curves estimated by the proposed method have a lower absolute relative bias than the values estimated solely based on the available daily-confirmed cases. CONCLUSION: The proposed method provides a more accurate real-time estimation of the daily new cases and daily cumulative number of infected cases. The model makes use of the most recent "moving window" of information relative to suspect cases and dynamically updates the parameters. The proposed method will be useful for the real-time evaluation of a disease outbreak when case classification requires a time-consuming laboratory process to identify a confirmed case.
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spelling pubmed-28948332010-07-01 A dynamic estimation of the daily cumulative cases during infectious disease surveillance: application to dengue fever Chuang, Pei-Hung Chuang, Jen-Hsiang Lin, I-Feng BMC Infect Dis Research Article BACKGROUND: In infectious disease surveillance, when the laboratory confirmation of the cases is time-consuming, there is often a time lag between the number of suspect cases and the number of confirmed cases. This study proposes a dynamic statistical model to estimate the daily number of new cases and the daily cumulative number of infected cases, which was then applied to historic dengue fever data. METHODS: The duration between the date of disease onset and date of laboratory confirmation was assumed to follow a gamma distribution or a nonparametric distribution. A conditional probability of a case being a real case among the unconfirmed cases on a given date was then calculated. This probability along with the observed confirmed cases was integrated to estimate the daily number of new cases and the cumulative number of infected cases. RESULTS: The distribution of the onset-to-confirmation time for the positive cases was different from that of the negative cases. The daily new cases and cumulative epidemic curves estimated by the proposed method have a lower absolute relative bias than the values estimated solely based on the available daily-confirmed cases. CONCLUSION: The proposed method provides a more accurate real-time estimation of the daily new cases and daily cumulative number of infected cases. The model makes use of the most recent "moving window" of information relative to suspect cases and dynamically updates the parameters. The proposed method will be useful for the real-time evaluation of a disease outbreak when case classification requires a time-consuming laboratory process to identify a confirmed case. BioMed Central 2010-05-27 /pmc/articles/PMC2894833/ /pubmed/20504379 http://dx.doi.org/10.1186/1471-2334-10-136 Text en Copyright ©2010 Chuang et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Chuang, Pei-Hung
Chuang, Jen-Hsiang
Lin, I-Feng
A dynamic estimation of the daily cumulative cases during infectious disease surveillance: application to dengue fever
title A dynamic estimation of the daily cumulative cases during infectious disease surveillance: application to dengue fever
title_full A dynamic estimation of the daily cumulative cases during infectious disease surveillance: application to dengue fever
title_fullStr A dynamic estimation of the daily cumulative cases during infectious disease surveillance: application to dengue fever
title_full_unstemmed A dynamic estimation of the daily cumulative cases during infectious disease surveillance: application to dengue fever
title_short A dynamic estimation of the daily cumulative cases during infectious disease surveillance: application to dengue fever
title_sort dynamic estimation of the daily cumulative cases during infectious disease surveillance: application to dengue fever
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2894833/
https://www.ncbi.nlm.nih.gov/pubmed/20504379
http://dx.doi.org/10.1186/1471-2334-10-136
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