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myExperiment: a repository and social network for the sharing of bioinformatics workflows
myExperiment (http://www.myexperiment.org) is an online research environment that supports the social sharing of bioinformatics workflows. These workflows are procedures consisting of a series of computational tasks using web services, which may be performed on data from its retrieval, integration a...
Autores principales: | , , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2896080/ https://www.ncbi.nlm.nih.gov/pubmed/20501605 http://dx.doi.org/10.1093/nar/gkq429 |
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author | Goble, Carole A. Bhagat, Jiten Aleksejevs, Sergejs Cruickshank, Don Michaelides, Danius Newman, David Borkum, Mark Bechhofer, Sean Roos, Marco Li, Peter De Roure, David |
author_facet | Goble, Carole A. Bhagat, Jiten Aleksejevs, Sergejs Cruickshank, Don Michaelides, Danius Newman, David Borkum, Mark Bechhofer, Sean Roos, Marco Li, Peter De Roure, David |
author_sort | Goble, Carole A. |
collection | PubMed |
description | myExperiment (http://www.myexperiment.org) is an online research environment that supports the social sharing of bioinformatics workflows. These workflows are procedures consisting of a series of computational tasks using web services, which may be performed on data from its retrieval, integration and analysis, to the visualization of the results. As a public repository of workflows, myExperiment allows anybody to discover those that are relevant to their research, which can then be reused and repurposed to their specific requirements. Conversely, developers can submit their workflows to myExperiment and enable them to be shared in a secure manner. Since its release in 2007, myExperiment currently has over 3500 registered users and contains more than 1000 workflows. The social aspect to the sharing of these workflows is facilitated by registered users forming virtual communities bound together by a common interest or research project. Contributors of workflows can build their reputation within these communities by receiving feedback and credit from individuals who reuse their work. Further documentation about myExperiment including its REST web service is available from http://wiki.myexperiment.org. Feedback and requests for support can be sent to bugs@myexperiment.org. |
format | Text |
id | pubmed-2896080 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-28960802010-07-02 myExperiment: a repository and social network for the sharing of bioinformatics workflows Goble, Carole A. Bhagat, Jiten Aleksejevs, Sergejs Cruickshank, Don Michaelides, Danius Newman, David Borkum, Mark Bechhofer, Sean Roos, Marco Li, Peter De Roure, David Nucleic Acids Res Articles myExperiment (http://www.myexperiment.org) is an online research environment that supports the social sharing of bioinformatics workflows. These workflows are procedures consisting of a series of computational tasks using web services, which may be performed on data from its retrieval, integration and analysis, to the visualization of the results. As a public repository of workflows, myExperiment allows anybody to discover those that are relevant to their research, which can then be reused and repurposed to their specific requirements. Conversely, developers can submit their workflows to myExperiment and enable them to be shared in a secure manner. Since its release in 2007, myExperiment currently has over 3500 registered users and contains more than 1000 workflows. The social aspect to the sharing of these workflows is facilitated by registered users forming virtual communities bound together by a common interest or research project. Contributors of workflows can build their reputation within these communities by receiving feedback and credit from individuals who reuse their work. Further documentation about myExperiment including its REST web service is available from http://wiki.myexperiment.org. Feedback and requests for support can be sent to bugs@myexperiment.org. Oxford University Press 2010-07-01 2010-05-25 /pmc/articles/PMC2896080/ /pubmed/20501605 http://dx.doi.org/10.1093/nar/gkq429 Text en © The Author(s) 2010. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Goble, Carole A. Bhagat, Jiten Aleksejevs, Sergejs Cruickshank, Don Michaelides, Danius Newman, David Borkum, Mark Bechhofer, Sean Roos, Marco Li, Peter De Roure, David myExperiment: a repository and social network for the sharing of bioinformatics workflows |
title | myExperiment: a repository and social network for the sharing of bioinformatics workflows |
title_full | myExperiment: a repository and social network for the sharing of bioinformatics workflows |
title_fullStr | myExperiment: a repository and social network for the sharing of bioinformatics workflows |
title_full_unstemmed | myExperiment: a repository and social network for the sharing of bioinformatics workflows |
title_short | myExperiment: a repository and social network for the sharing of bioinformatics workflows |
title_sort | myexperiment: a repository and social network for the sharing of bioinformatics workflows |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2896080/ https://www.ncbi.nlm.nih.gov/pubmed/20501605 http://dx.doi.org/10.1093/nar/gkq429 |
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