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IBWS: IST Bioinformatics Web Services
The Bioinformatics group at the National Cancer Research Institute (IST) of Genoa has been involved since many years in the development and maintenance of biomedical information systems. Among them, the Common Access to Biological Resources and Information network services offer access to more than...
Autores principales: | , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2896171/ https://www.ncbi.nlm.nih.gov/pubmed/20484374 http://dx.doi.org/10.1093/nar/gkq416 |
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author | Zappa, Achille Miele, Mariangela Romano, Paolo |
author_facet | Zappa, Achille Miele, Mariangela Romano, Paolo |
author_sort | Zappa, Achille |
collection | PubMed |
description | The Bioinformatics group at the National Cancer Research Institute (IST) of Genoa has been involved since many years in the development and maintenance of biomedical information systems. Among them, the Common Access to Biological Resources and Information network services offer access to more than 130 000 biological resources, like strains of micro-organisms and human and animal cell lines, included in 29 collections from some of the most known European Biological Resource Centers. An Sequence Retrieval System (SRS) implementation of the TP53 Mutation Database of the International Agency for Research on Cancer (Lyon) was made available in order to improve interoperability of this data with other molecular biology databases. ‘SRS by WS (SWS)’, a system for retrieving information on public SRS sites and for directly querying them, was also implemented. In order to make this information available through application programming interfaces, we implemented a suite of free web services (WS), called the ‘IST Bioinformatics Web Services (IBWS)’. A support web site, including a description of the system, a list of available WS together with help pages, links to corresponding WSDLs and forms for testing services, is available at http://bioinformatics.istge.it/ibws/. WSDL definitions can also be retrieved directly at http://bioinformatics.istge.it:8080/axis/services. |
format | Text |
id | pubmed-2896171 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-28961712010-07-02 IBWS: IST Bioinformatics Web Services Zappa, Achille Miele, Mariangela Romano, Paolo Nucleic Acids Res Web Services The Bioinformatics group at the National Cancer Research Institute (IST) of Genoa has been involved since many years in the development and maintenance of biomedical information systems. Among them, the Common Access to Biological Resources and Information network services offer access to more than 130 000 biological resources, like strains of micro-organisms and human and animal cell lines, included in 29 collections from some of the most known European Biological Resource Centers. An Sequence Retrieval System (SRS) implementation of the TP53 Mutation Database of the International Agency for Research on Cancer (Lyon) was made available in order to improve interoperability of this data with other molecular biology databases. ‘SRS by WS (SWS)’, a system for retrieving information on public SRS sites and for directly querying them, was also implemented. In order to make this information available through application programming interfaces, we implemented a suite of free web services (WS), called the ‘IST Bioinformatics Web Services (IBWS)’. A support web site, including a description of the system, a list of available WS together with help pages, links to corresponding WSDLs and forms for testing services, is available at http://bioinformatics.istge.it/ibws/. WSDL definitions can also be retrieved directly at http://bioinformatics.istge.it:8080/axis/services. Oxford University Press 2010-07-01 2010-05-19 /pmc/articles/PMC2896171/ /pubmed/20484374 http://dx.doi.org/10.1093/nar/gkq416 Text en © The Author(s) 2010. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Web Services Zappa, Achille Miele, Mariangela Romano, Paolo IBWS: IST Bioinformatics Web Services |
title | IBWS: IST Bioinformatics Web Services |
title_full | IBWS: IST Bioinformatics Web Services |
title_fullStr | IBWS: IST Bioinformatics Web Services |
title_full_unstemmed | IBWS: IST Bioinformatics Web Services |
title_short | IBWS: IST Bioinformatics Web Services |
title_sort | ibws: ist bioinformatics web services |
topic | Web Services |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2896171/ https://www.ncbi.nlm.nih.gov/pubmed/20484374 http://dx.doi.org/10.1093/nar/gkq416 |
work_keys_str_mv | AT zappaachille ibwsistbioinformaticswebservices AT mielemariangela ibwsistbioinformaticswebservices AT romanopaolo ibwsistbioinformaticswebservices |