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MOWServ: a web client for integration of bioinformatic resources
The productivity of any scientist is affected by cumbersome, tedious and time-consuming tasks that try to make the heterogeneous web services compatible so that they can be useful in their research. MOWServ, the bioinformatic platform offered by the Spanish National Institute of Bioinformatics, was...
Autores principales: | , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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Oxford University Press
2010
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2896175/ https://www.ncbi.nlm.nih.gov/pubmed/20525794 http://dx.doi.org/10.1093/nar/gkq497 |
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author | Ramírez, Sergio Muñoz-Mérida, Antonio Karlsson, Johan García, Maximiliano Pérez-Pulido, Antonio J. Claros, M. Gonzalo Trelles, Oswaldo |
author_facet | Ramírez, Sergio Muñoz-Mérida, Antonio Karlsson, Johan García, Maximiliano Pérez-Pulido, Antonio J. Claros, M. Gonzalo Trelles, Oswaldo |
author_sort | Ramírez, Sergio |
collection | PubMed |
description | The productivity of any scientist is affected by cumbersome, tedious and time-consuming tasks that try to make the heterogeneous web services compatible so that they can be useful in their research. MOWServ, the bioinformatic platform offered by the Spanish National Institute of Bioinformatics, was released to provide integrated access to databases and analytical tools. Since its release, the number of available services has grown dramatically, and it has become one of the main contributors of registered services in the EMBRACE Biocatalogue. The ontology that enables most of the web-service compatibility has been curated, improved and extended. The service discovery has been greatly enhanced by Magallanes software and biodataSF. User data are securely stored on the main server by an authentication protocol that enables the monitoring of current or already-finished user’s tasks, as well as the pipelining of successive data processing services. The BioMoby standard has been greatly extended with the new features included in the MOWServ, such as management of additional information (metadata such as extended descriptions, keywords and datafile examples), a qualified registry, error handling, asynchronous services and service replication. All of them have increased the MOWServ service quality, usability and robustness. MOWServ is available at http://www.inab.org/MOWServ/ and has a mirror at http://www.bitlab-es.com/MOWServ/. |
format | Text |
id | pubmed-2896175 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-28961752010-07-02 MOWServ: a web client for integration of bioinformatic resources Ramírez, Sergio Muñoz-Mérida, Antonio Karlsson, Johan García, Maximiliano Pérez-Pulido, Antonio J. Claros, M. Gonzalo Trelles, Oswaldo Nucleic Acids Res Articles The productivity of any scientist is affected by cumbersome, tedious and time-consuming tasks that try to make the heterogeneous web services compatible so that they can be useful in their research. MOWServ, the bioinformatic platform offered by the Spanish National Institute of Bioinformatics, was released to provide integrated access to databases and analytical tools. Since its release, the number of available services has grown dramatically, and it has become one of the main contributors of registered services in the EMBRACE Biocatalogue. The ontology that enables most of the web-service compatibility has been curated, improved and extended. The service discovery has been greatly enhanced by Magallanes software and biodataSF. User data are securely stored on the main server by an authentication protocol that enables the monitoring of current or already-finished user’s tasks, as well as the pipelining of successive data processing services. The BioMoby standard has been greatly extended with the new features included in the MOWServ, such as management of additional information (metadata such as extended descriptions, keywords and datafile examples), a qualified registry, error handling, asynchronous services and service replication. All of them have increased the MOWServ service quality, usability and robustness. MOWServ is available at http://www.inab.org/MOWServ/ and has a mirror at http://www.bitlab-es.com/MOWServ/. Oxford University Press 2010-07-01 2010-06-04 /pmc/articles/PMC2896175/ /pubmed/20525794 http://dx.doi.org/10.1093/nar/gkq497 Text en © The Author(s) 2010. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Ramírez, Sergio Muñoz-Mérida, Antonio Karlsson, Johan García, Maximiliano Pérez-Pulido, Antonio J. Claros, M. Gonzalo Trelles, Oswaldo MOWServ: a web client for integration of bioinformatic resources |
title | MOWServ: a web client for integration of bioinformatic resources |
title_full | MOWServ: a web client for integration of bioinformatic resources |
title_fullStr | MOWServ: a web client for integration of bioinformatic resources |
title_full_unstemmed | MOWServ: a web client for integration of bioinformatic resources |
title_short | MOWServ: a web client for integration of bioinformatic resources |
title_sort | mowserv: a web client for integration of bioinformatic resources |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2896175/ https://www.ncbi.nlm.nih.gov/pubmed/20525794 http://dx.doi.org/10.1093/nar/gkq497 |
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