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Crystallization and preliminary X-ray diffraction analysis of the N-terminal domain of human coronavirus OC43 nucleocapsid protein

The N-terminal domain of nucleocapsid protein from human coronavirus OC43 (HCoV-OC43 N-NTD) mostly contains positively charged residues and has been identified as being responsible for RNA binding during ribonucleocapsid formation in the coronavirus. In this study, the crystallization and preliminar...

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Autores principales: Chen, I-Jung, Chou, Chia-Cheng, Liu, Chia-Ling, Lee, Cheng-Chung, Kan, Lou-Sing, Hou, Ming-Hon
Formato: Texto
Lenguaje:English
Publicado: International Union of Crystallography 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2898469/
https://www.ncbi.nlm.nih.gov/pubmed/20606281
http://dx.doi.org/10.1107/S1744309110017616
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author Chen, I-Jung
Chou, Chia-Cheng
Liu, Chia-Ling
Lee, Cheng-Chung
Kan, Lou-Sing
Hou, Ming-Hon
author_facet Chen, I-Jung
Chou, Chia-Cheng
Liu, Chia-Ling
Lee, Cheng-Chung
Kan, Lou-Sing
Hou, Ming-Hon
author_sort Chen, I-Jung
collection PubMed
description The N-terminal domain of nucleocapsid protein from human coronavirus OC43 (HCoV-OC43 N-NTD) mostly contains positively charged residues and has been identified as being responsible for RNA binding during ribonucleocapsid formation in the coronavirus. In this study, the crystallization and preliminary crystallographic analysis of HCoV-OC43 N-NTD (amino acids 58–195) with a molecular weight of 20 kDa are reported. HCoV-OC43 N-NTD was crystallized at 293 K using PEG 1500 as a precipitant and a 99.9% complete native data set was collected to 1.7 Å resolution at 100 K with an overall R (merge) of 5.0%. The crystals belonged to the hexagonal space group P6(5), with unit-cell parameters a = 81.57, c = 42.87 Å. Solvent-content calculations suggest that there is likely to be one subunit of N-NTD in the asymmetric unit.
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spelling pubmed-28984692012-07-01 Crystallization and preliminary X-ray diffraction analysis of the N-terminal domain of human coronavirus OC43 nucleocapsid protein Chen, I-Jung Chou, Chia-Cheng Liu, Chia-Ling Lee, Cheng-Chung Kan, Lou-Sing Hou, Ming-Hon Acta Crystallogr Sect F Struct Biol Cryst Commun Crystallization Communications The N-terminal domain of nucleocapsid protein from human coronavirus OC43 (HCoV-OC43 N-NTD) mostly contains positively charged residues and has been identified as being responsible for RNA binding during ribonucleocapsid formation in the coronavirus. In this study, the crystallization and preliminary crystallographic analysis of HCoV-OC43 N-NTD (amino acids 58–195) with a molecular weight of 20 kDa are reported. HCoV-OC43 N-NTD was crystallized at 293 K using PEG 1500 as a precipitant and a 99.9% complete native data set was collected to 1.7 Å resolution at 100 K with an overall R (merge) of 5.0%. The crystals belonged to the hexagonal space group P6(5), with unit-cell parameters a = 81.57, c = 42.87 Å. Solvent-content calculations suggest that there is likely to be one subunit of N-NTD in the asymmetric unit. International Union of Crystallography 2010-06-24 /pmc/articles/PMC2898469/ /pubmed/20606281 http://dx.doi.org/10.1107/S1744309110017616 Text en © International Union of Crystallography 2010
spellingShingle Crystallization Communications
Chen, I-Jung
Chou, Chia-Cheng
Liu, Chia-Ling
Lee, Cheng-Chung
Kan, Lou-Sing
Hou, Ming-Hon
Crystallization and preliminary X-ray diffraction analysis of the N-terminal domain of human coronavirus OC43 nucleocapsid protein
title Crystallization and preliminary X-ray diffraction analysis of the N-terminal domain of human coronavirus OC43 nucleocapsid protein
title_full Crystallization and preliminary X-ray diffraction analysis of the N-terminal domain of human coronavirus OC43 nucleocapsid protein
title_fullStr Crystallization and preliminary X-ray diffraction analysis of the N-terminal domain of human coronavirus OC43 nucleocapsid protein
title_full_unstemmed Crystallization and preliminary X-ray diffraction analysis of the N-terminal domain of human coronavirus OC43 nucleocapsid protein
title_short Crystallization and preliminary X-ray diffraction analysis of the N-terminal domain of human coronavirus OC43 nucleocapsid protein
title_sort crystallization and preliminary x-ray diffraction analysis of the n-terminal domain of human coronavirus oc43 nucleocapsid protein
topic Crystallization Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2898469/
https://www.ncbi.nlm.nih.gov/pubmed/20606281
http://dx.doi.org/10.1107/S1744309110017616
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