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Estimating view parameters from random projections for Tomography using spherical MDS

BACKGROUND: During the past decade, the computed tomography has been successfully applied to various fields especially in medicine. The estimation of view angles for projections is necessary in some special applications of tomography, for example, the structuring of viruses using electron microscopy...

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Detalles Bibliográficos
Autores principales: Fang, Yi, Murugappan, Sundar, Ramani, Karthik
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2898708/
https://www.ncbi.nlm.nih.gov/pubmed/20565859
http://dx.doi.org/10.1186/1471-2342-10-12
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author Fang, Yi
Murugappan, Sundar
Ramani, Karthik
author_facet Fang, Yi
Murugappan, Sundar
Ramani, Karthik
author_sort Fang, Yi
collection PubMed
description BACKGROUND: During the past decade, the computed tomography has been successfully applied to various fields especially in medicine. The estimation of view angles for projections is necessary in some special applications of tomography, for example, the structuring of viruses using electron microscopy and the compensation of the patient's motion over long scanning period. METHODS: This work introduces a novel approach, based on the spherical multidimensional scaling (sMDS), which transforms the problem of the angle estimation to a sphere constrained embedding problem. The proposed approach views each projection as a high dimensional vector with dimensionality equal to the number of sampling points on the projection. By using SMDS, then each projection vector is embedded onto a 1D sphere which parameterizes the projection with respect to view angles in a globally consistent manner. The parameterized projections are used for the final reconstruction of the image through the inverse radon transform. The entire reconstruction process is non-iterative and computationally efficient. RESULTS: The effectiveness of the sMDS is verified with various experiments, including the evaluation of the reconstruction quality from different number of projections and resistance to different noise levels. The experimental results demonstrate the efficiency of the proposed method. CONCLUSION: Our study provides an effective technique for the solution of 2D tomography with unknown acquisition view angles. The proposed method will be extended to three dimensional reconstructions in our future work. All materials, including source code and demos, are available on https://engineering.purdue.edu/PRECISE/SMDS.
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spelling pubmed-28987082010-07-08 Estimating view parameters from random projections for Tomography using spherical MDS Fang, Yi Murugappan, Sundar Ramani, Karthik BMC Med Imaging Research Article BACKGROUND: During the past decade, the computed tomography has been successfully applied to various fields especially in medicine. The estimation of view angles for projections is necessary in some special applications of tomography, for example, the structuring of viruses using electron microscopy and the compensation of the patient's motion over long scanning period. METHODS: This work introduces a novel approach, based on the spherical multidimensional scaling (sMDS), which transforms the problem of the angle estimation to a sphere constrained embedding problem. The proposed approach views each projection as a high dimensional vector with dimensionality equal to the number of sampling points on the projection. By using SMDS, then each projection vector is embedded onto a 1D sphere which parameterizes the projection with respect to view angles in a globally consistent manner. The parameterized projections are used for the final reconstruction of the image through the inverse radon transform. The entire reconstruction process is non-iterative and computationally efficient. RESULTS: The effectiveness of the sMDS is verified with various experiments, including the evaluation of the reconstruction quality from different number of projections and resistance to different noise levels. The experimental results demonstrate the efficiency of the proposed method. CONCLUSION: Our study provides an effective technique for the solution of 2D tomography with unknown acquisition view angles. The proposed method will be extended to three dimensional reconstructions in our future work. All materials, including source code and demos, are available on https://engineering.purdue.edu/PRECISE/SMDS. BioMed Central 2010-06-18 /pmc/articles/PMC2898708/ /pubmed/20565859 http://dx.doi.org/10.1186/1471-2342-10-12 Text en Copyright ©2010 Fang et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Fang, Yi
Murugappan, Sundar
Ramani, Karthik
Estimating view parameters from random projections for Tomography using spherical MDS
title Estimating view parameters from random projections for Tomography using spherical MDS
title_full Estimating view parameters from random projections for Tomography using spherical MDS
title_fullStr Estimating view parameters from random projections for Tomography using spherical MDS
title_full_unstemmed Estimating view parameters from random projections for Tomography using spherical MDS
title_short Estimating view parameters from random projections for Tomography using spherical MDS
title_sort estimating view parameters from random projections for tomography using spherical mds
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2898708/
https://www.ncbi.nlm.nih.gov/pubmed/20565859
http://dx.doi.org/10.1186/1471-2342-10-12
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