Cargando…

(13)C-direct detected NMR experiments for the sequential J-based resonance assignment of RNA oligonucleotides

We present here a set of (13)C-direct detected NMR experiments to facilitate the resonance assignment of RNA oligonucleotides. Three experiments have been developed: (1) the (H)CC-TOCSY-experiment utilizing a virtual decoupling scheme to assign the intraresidual ribose (13)C-spins, (2) the (H)CPC-ex...

Descripción completa

Detalles Bibliográficos
Autores principales:	Richter, Christian, Kovacs, Helena, Buck, Janina, Wacker, Anna, Fürtig, Boris, Bermel, Wolfgang, Schwalbe, Harald
Formato:	Texto
Lenguaje:	English
Publicado:	Springer Netherlands 2010
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2900595/ https://www.ncbi.nlm.nih.gov/pubmed/20544375 http://dx.doi.org/10.1007/s10858-010-9429-5

Ejemplares similares

Novel (13)C‐detected NMR Experiments for the Precise Detection of RNA Structure
por: Schnieders, Robbin, et al.
Publicado: (2019)

Structure and dynamics of the deoxyguanosine-sensing riboswitch studied by NMR-spectroscopy
por: Wacker, Anna, et al.
Publicado: (2011)

More than Proton Detection—New Avenues for NMR Spectroscopy of RNA
por: Schnieders, Robbin, et al.
Publicado: (2019)

High-resolution NMR structure of an RNA model system: the 14-mer cUUCGg tetraloop hairpin RNA
por: Nozinovic, Senada, et al.
Publicado: (2010)

NMR resonance assignment of a fibroblast growth factor 8 splicing isoform b
por: Hargittay, Bruno, et al.
Publicado: (2023)

(1)H, (13)C, and (15)N backbone chemical shift assignments of the C-terminal dimerization domain of SARS-CoV-2 nucleocapsid protein
por: Korn, Sophie M., et al.
Publicado: (2020)

NMR assignment of non-modified tRNA(Ile) from Escherichia coli
por: de Jesus, Vanessa, et al.
Publicado: (2022)

Interplay of ‘induced fit’ and preorganization in the ligand induced folding of the aptamer domain of the guanine binding riboswitch
por: Noeske, Jonas, et al.
Publicado: (2007)

Gemeinschaftlich in Krisenzeiten: NMR-Strukturbiologie gegen COVID-19
por: Schlundt, A., et al.
Publicado: (2020)

Ligand-modulated folding of the full-length adenine riboswitch probed by NMR and single-molecule FRET spectroscopy
por: Warhaut, Sven, et al.
Publicado: (2017)

(1)H, (13)C, and (15)N backbone chemical shift assignments of the nucleic acid-binding domain of SARS-CoV-2 non-structural protein 3e
por: Korn, Sophie M., et al.
Publicado: (2020)

Integrated NMR/Molecular Dynamics Determination of the Ensemble Conformation of a Thermodynamically Stable CUUG RNA Tetraloop
por: Oxenfarth, Andreas, et al.
Publicado: (2023)

Contact replacement for NMR resonance assignment
por: Xiong, Fei, et al.
Publicado: (2008)

NMR structure of the Vibrio vulnificus ribosomal protein S1 domains D3 and D4 provides insights into molecular recognition of single-stranded RNAs
por: Qureshi, Nusrat Shahin, et al.
Publicado: (2021)

(1)H, (13)C, (15)N and (31)P chemical shift assignment for stem-loop 4 from the 5′-UTR of SARS-CoV-2
por: Vögele, Jennifer, et al.
Publicado: (2021)

(1)H, (13)C and (15)N chemical shift assignment of the stem-loop 5a from the 5′-UTR of SARS-CoV-2
por: Schnieders, Robbin, et al.
Publicado: (2021)

Complete protein assignment from sets of spectra recorded overnight
por: Fredriksson, Jonas, et al.
Publicado: (2019)

Unambiguous Assignment of the (1)H- and (13)C-NMR Spectra of Propafenone and a Thiophene Analogue
por: Holzer, Wolfgang
Publicado: (2001)

The cotranscriptional folding landscape for two cyclic di-nucleotide-sensing riboswitches with highly homologous aptamer domains acting either as ON- or OFF-switches
por: Landgraf, Tom, et al.
Publicado: (2022)

Influence of ground-state structure and Mg(2+) binding on folding kinetics of the guanine-sensing riboswitch aptamer domain
por: Buck, Janina, et al.
Publicado: (2011)

Assignment of Regioirregular Sequences in the (13)C NMR Spectrum of Syndiotactic Polypropylene
por: Cipullo, Roberta, et al.
Publicado: (2018)

PHRONESIS: A One‐Shot Approach for Sequential Assignment of Protein Resonances by Ultrafast MAS Solid‐State NMR Spectroscopy
por: Gopinath, Tata, et al.
Publicado: (2022)

Facilitated Assignment of Large Protein NMR Signals with Covariance Sequential Spectra Using Spectral Derivatives
por: Harden, Bradley J., et al.
Publicado: (2014)

Life times of metastable states guide regulatory signaling in transcriptional riboswitches
por: Helmling, Christina, et al.
Publicado: (2018)

Automated Resonance Assignment of Proteins: 6 DAPSY-NMR
por: Fiorito, Francesco, et al.
Publicado: (2006)

NMR resonance assignment and dynamics of profilin from Heimdallarchaeota
por: Haq, Syed Razaul, et al.
Publicado: (2020)

(1)H, (13)C and (15)N chemical shift assignment of the stem-loops 5b + c from the 5′-UTR of SARS-CoV-2
por: Mertinkus, Klara R., et al.
Publicado: (2022)

(1)H, (13)C and (15)N assignment of stem-loop SL1 from the 5'-UTR of SARS-CoV-2
por: Richter, Christian, et al.
Publicado: (2021)

(1)H, (13)C, and (15)N backbone chemical shift assignments of coronavirus-2 non-structural protein Nsp10
por: Kubatova, N., et al.
Publicado: (2020)

(13)C-detected NMR experiments for automatic resonance assignment of IDPs and multiple-fixing SMFT processing
por: Dziekański, Paweł, et al.
Publicado: (2015)

Characterization of Structure and Dynamics of the Guanidine‐II Riboswitch from Escherichia coli by NMR Spectroscopy and Small‐Angle X‐ray Scattering (SAXS)
por: Schamber, Tatjana, et al.
Publicado: (2021)

In‐Cell NMR Spectroscopy of Functional Riboswitch Aptamers in Eukaryotic Cells
por: Broft, P., et al.
Publicado: (2020)

Pausing guides RNA folding to populate transiently stable RNA structures for riboswitch-based transcription regulation
por: Steinert, Hannah, et al.
Publicado: (2017)

Real-time nuclear magnetic resonance spectroscopy in the study of biomolecular kinetics and dynamics
por: Pintér, György, et al.
Publicado: (2021)

Conformational switch in the ribosomal protein S1 guides unfolding of structured RNAs for translation initiation
por: Qureshi, Nusrat Shahin, et al.
Publicado: (2018)

GANA—a genetic algorithm for NMR backbone resonance assignment
por: Lin, Hsin-Nan, et al.
Publicado: (2005)

Strategies for RNA Resonance Assignment by (13)C/(15)N- and (1)H-Detected Solid-State NMR Spectroscopy
por: Aguion, Philipp Innig, et al.
Publicado: (2021)

Real‐Time NMR Spectroscopy for Studying Metabolism
por: Alshamleh, Islam, et al.
Publicado: (2019)

Robust structure-based resonance assignment for functional protein studies by NMR
por: Stratmann, Dirk, et al.
Publicado: (2009)

NMR resonance assignments of the major apple allergen Mal d 1
por: Ahammer, Linda, et al.
Publicado: (2016)

Cannot write session to /tmp/vufind_sessions/sess_17rsovcos2kk0ri19m0532rupj