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Lack of association between the GRP78 polymorphisms in the promoter and 3' UTR and susceptibility to chronic HBV infection in a Chinese Han population
BACKGROUND: Hepatitis B virus (HBV) infection causes large amount of unfolding or false-folding protein accumulation in the endoplasmic reticulum (ER), which in turn induces the expression of glucose-regulated protein 78 (GRP78). The aim in the present study was to analyse the potential association...
Autores principales: | , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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BioMed Central
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2901214/ https://www.ncbi.nlm.nih.gov/pubmed/20525207 http://dx.doi.org/10.1186/1471-2350-11-83 |
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author | Zhu, Xiao Li, Dong-Pei Fan, Wen-Guo Lin, Marie CM Wang, Jin-Long Lin, Sheng-Qu Huang, Jian-Qing Kung, Hsiang-Fu |
author_facet | Zhu, Xiao Li, Dong-Pei Fan, Wen-Guo Lin, Marie CM Wang, Jin-Long Lin, Sheng-Qu Huang, Jian-Qing Kung, Hsiang-Fu |
author_sort | Zhu, Xiao |
collection | PubMed |
description | BACKGROUND: Hepatitis B virus (HBV) infection causes large amount of unfolding or false-folding protein accumulation in the endoplasmic reticulum (ER), which in turn induces the expression of glucose-regulated protein 78 (GRP78). The aim in the present study was to analyse the potential association between GRP78 single-nucleotide polymorphisms (SNPs) and the risk of HBV infection. METHODS: The associations between seven common GRP78 polymorphisms in the promoter (rs391957, rs17840762, rs17840761, rs11355458) and in the 3' untranslated region (UTR) (rs16927997, rs1140763, rs12009) and possible risk of chronic HBV infection were assessed in a case-control study. 496 cases and 539 individually matched healthy controls were genotyped. RESULTS: Overall, no associations were observed in genotypic analyses. In addition, haplotypes and diplotypes combining those SNPs in the promoter or in the 3' UTR in high linkage disequilibrium (LD) were also not associated with HBV risk. CONCLUSION: These observations do not support a role for GRP78 polymorphisms in HBV infection in a predominantly Chinese Han population. |
format | Text |
id | pubmed-2901214 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-29012142010-07-10 Lack of association between the GRP78 polymorphisms in the promoter and 3' UTR and susceptibility to chronic HBV infection in a Chinese Han population Zhu, Xiao Li, Dong-Pei Fan, Wen-Guo Lin, Marie CM Wang, Jin-Long Lin, Sheng-Qu Huang, Jian-Qing Kung, Hsiang-Fu BMC Med Genet Research Article BACKGROUND: Hepatitis B virus (HBV) infection causes large amount of unfolding or false-folding protein accumulation in the endoplasmic reticulum (ER), which in turn induces the expression of glucose-regulated protein 78 (GRP78). The aim in the present study was to analyse the potential association between GRP78 single-nucleotide polymorphisms (SNPs) and the risk of HBV infection. METHODS: The associations between seven common GRP78 polymorphisms in the promoter (rs391957, rs17840762, rs17840761, rs11355458) and in the 3' untranslated region (UTR) (rs16927997, rs1140763, rs12009) and possible risk of chronic HBV infection were assessed in a case-control study. 496 cases and 539 individually matched healthy controls were genotyped. RESULTS: Overall, no associations were observed in genotypic analyses. In addition, haplotypes and diplotypes combining those SNPs in the promoter or in the 3' UTR in high linkage disequilibrium (LD) were also not associated with HBV risk. CONCLUSION: These observations do not support a role for GRP78 polymorphisms in HBV infection in a predominantly Chinese Han population. BioMed Central 2010-06-02 /pmc/articles/PMC2901214/ /pubmed/20525207 http://dx.doi.org/10.1186/1471-2350-11-83 Text en Copyright ©2010 Zhu et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Zhu, Xiao Li, Dong-Pei Fan, Wen-Guo Lin, Marie CM Wang, Jin-Long Lin, Sheng-Qu Huang, Jian-Qing Kung, Hsiang-Fu Lack of association between the GRP78 polymorphisms in the promoter and 3' UTR and susceptibility to chronic HBV infection in a Chinese Han population |
title | Lack of association between the GRP78 polymorphisms in the promoter and 3' UTR and susceptibility to chronic HBV infection in a Chinese Han population |
title_full | Lack of association between the GRP78 polymorphisms in the promoter and 3' UTR and susceptibility to chronic HBV infection in a Chinese Han population |
title_fullStr | Lack of association between the GRP78 polymorphisms in the promoter and 3' UTR and susceptibility to chronic HBV infection in a Chinese Han population |
title_full_unstemmed | Lack of association between the GRP78 polymorphisms in the promoter and 3' UTR and susceptibility to chronic HBV infection in a Chinese Han population |
title_short | Lack of association between the GRP78 polymorphisms in the promoter and 3' UTR and susceptibility to chronic HBV infection in a Chinese Han population |
title_sort | lack of association between the grp78 polymorphisms in the promoter and 3' utr and susceptibility to chronic hbv infection in a chinese han population |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2901214/ https://www.ncbi.nlm.nih.gov/pubmed/20525207 http://dx.doi.org/10.1186/1471-2350-11-83 |
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